BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028049
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM08503.1|AC068654_5 Putative retroelement [Oryza sativa Jap...    65   6e-09
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...    64   1e-08
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...    64   1e-08
gb|ABA96443.2| retrotransposon protein, putative, Ty3-gypsy subc...    62   4e-08
gb|AAP53932.1| retrotransposon protein, putative, Ty3-gypsy subc...    62   6e-08

>gb|AAM08503.1|AC068654_5 Putative retroelement [Oryza sativa Japonica Group]
            gi|31429806|gb|AAP51808.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1047

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
 Frame = -3

Query: 278  INQINREENYEAYELSRLVRNSAELDSSVYFEELEKPA--IEQEEVIEID------DHPN 123
            +  + R +N EA  L++           ++FE L  P+  IE  EV+ ID      D  +
Sbjct: 872  VEHLPRGQNEEADTLAKSAACGGPHSLGIFFEVLYAPSVPIESLEVMAIDQAELGNDPED 931

Query: 122  WMTPFILYLDKGELPEDKNEARRLKNKTAKFFIEKGQLYR 3
            W TPF+ YLD G LPED+ EA+RL+ + AK+ +  GQLYR
Sbjct: 932  WRTPFVKYLDCGWLPEDEAEAKRLQLRAAKYKMVSGQLYR 971


>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/92 (34%), Positives = 56/92 (60%)
 Frame = -3

Query: 278  INQINREENYEAYELSRLVRNSAELDSSVYFEELEKPAIEQEEVIEIDDHPNWMTPFILY 99
            +  I REEN EA EL++       L++S +F+ + +P+ E++EV  I    +W  P + Y
Sbjct: 1505 VKAITREENGEADELAKAAATGQPLENS-FFDIITQPSYEKKEVACIQREGDWREPILKY 1563

Query: 98   LDKGELPEDKNEARRLKNKTAKFFIEKGQLYR 3
            L   +LPE + EA+R++  + K+ + +GQLY+
Sbjct: 1564 LVSAQLPEKEEEAKRIQLTSKKYKVVEGQLYK 1595


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/92 (34%), Positives = 56/92 (60%)
 Frame = -3

Query: 278  INQINREENYEAYELSRLVRNSAELDSSVYFEELEKPAIEQEEVIEIDDHPNWMTPFILY 99
            +  I REEN EA EL++       L++S +F+ + +P+ E++EV  I    +W  P + Y
Sbjct: 1523 VKAITREENGEADELAKAAATGQPLENS-FFDIITQPSYEKKEVACIQREGDWREPILKY 1581

Query: 98   LDKGELPEDKNEARRLKNKTAKFFIEKGQLYR 3
            L   +LPE + EA+R++  + K+ + +GQLY+
Sbjct: 1582 LVSAQLPEKEEEAKRIQLTSKKYKVVEGQLYK 1613


>gb|ABA96443.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1472

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
 Frame = -3

Query: 278  INQINREENYEAYELSRLVRNSAELDSSVYFEELEKPAIEQEEVIEI--------DDHPN 123
            +  + R +N EA  L+R           ++FE L  P++  E ++ +        +D  +
Sbjct: 1213 VEHLPRGQNEEADALARSAACGGPHSPGIFFEVLYAPSVPAESLVILAIDQAELGEDAED 1272

Query: 122  WMTPFILYLDKGELPEDKNEARRLKNKTAKFFIEKGQLYR 3
            W TPF+ YL  G LPED+ EA+RL+ +  K+ +  GQLYR
Sbjct: 1273 WRTPFVKYLKNGWLPEDEAEAKRLQLRATKYKLISGQLYR 1312


>gb|AAP53932.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 842

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
 Frame = -3

Query: 278 INQINREENYEAYELSRLVRNSAELDSSVYFEELEKPAIEQE--EVIEID------DHPN 123
           +  + R +N EA  L++           ++FE L  P++  E  +V+ ID      D  +
Sbjct: 436 VEHLPRGQNEEADTLAKSAACGGPHSPGIFFEVLYAPSVPTERLDVMAIDQAELGKDPED 495

Query: 122 WMTPFILYLDKGELPEDKNEARRLKNKTAKFFIEKGQLYR 3
           W TPF+ YL  G LPED+ EA+RL+ +  K+ +  GQLYR
Sbjct: 496 WRTPFVKYLKNGWLPEDEAEAKRLQLRAVKYKLVSGQLYR 535