BLASTX nr result

ID: Angelica23_contig00027476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00027476
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36
emb|CBI19926.3| unnamed protein product [Vitis vinifera]              156   1e-36
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]   156   1e-36
ref|XP_002520264.1| pentatricopeptide repeat-containing protein,...   152   3e-35
ref|XP_002306667.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34

>ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Vitis vinifera]
          Length = 665

 Score =  156 bits (395), Expect = 1e-36
 Identities = 73/117 (62%), Positives = 92/117 (78%)
 Frame = -1

Query: 358 IDFATMIFDDMGLKDLISWNTMILGLTCNGKVAESLDLFKELLERGPPPDHVTMTGVLSA 179
           ID A   F  +G +DLISWNTMI+GL  NG+V+++L++FKELL  GPPPD +T+ GVL A
Sbjct: 420 IDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLA 479

Query: 178 CNYGGFVDEGMSIFALMEKQYGVKPVGEHYVCVVDMMSRAGHLEEALNILETMPCEP 8
           CN GG VDEG+SIF+ MEK+YGV P  EHY C+VDMMSR G L+EA++I+E MP EP
Sbjct: 480 CNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEP 536


>emb|CBI19926.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  156 bits (395), Expect = 1e-36
 Identities = 73/117 (62%), Positives = 92/117 (78%)
 Frame = -1

Query: 358 IDFATMIFDDMGLKDLISWNTMILGLTCNGKVAESLDLFKELLERGPPPDHVTMTGVLSA 179
           ID A   F  +G +DLISWNTMI+GL  NG+V+++L++FKELL  GPPPD +T+ GVL A
Sbjct: 167 IDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLA 226

Query: 178 CNYGGFVDEGMSIFALMEKQYGVKPVGEHYVCVVDMMSRAGHLEEALNILETMPCEP 8
           CN GG VDEG+SIF+ MEK+YGV P  EHY C+VDMMSR G L+EA++I+E MP EP
Sbjct: 227 CNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEP 283


>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  156 bits (395), Expect = 1e-36
 Identities = 73/117 (62%), Positives = 92/117 (78%)
 Frame = -1

Query: 358  IDFATMIFDDMGLKDLISWNTMILGLTCNGKVAESLDLFKELLERGPPPDHVTMTGVLSA 179
            ID A   F  +G +DLISWNTMI+GL  NG+V+++L++FKELL  GPPPD +T+ GVL A
Sbjct: 1093 IDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLA 1152

Query: 178  CNYGGFVDEGMSIFALMEKQYGVKPVGEHYVCVVDMMSRAGHLEEALNILETMPCEP 8
            CN GG VDEG+SIF+ MEK+YGV P  EHY C+VDMMSR G L+EA++I+E MP EP
Sbjct: 1153 CNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEP 1209



 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/114 (40%), Positives = 71/114 (62%)
 Frame = -1

Query: 358 IDFATMIFDDMGLKDLISWNTMILGLTCNGKVAESLDLFKELLERGPPPDHVTMTGVLSA 179
           ++    +FD M   D + WN+M++G   NG   E+L++F ++   G  P  +T  GVLSA
Sbjct: 488 VEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSA 547

Query: 178 CNYGGFVDEGMSIFALMEKQYGVKPVGEHYVCVVDMMSRAGHLEEALNILETMP 17
           C++ G V+EG   F  M+  Y + P  EHY C+VD+ +RAG LE+A+N++E MP
Sbjct: 548 CDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMP 601



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/75 (45%), Positives = 45/75 (60%)
 Frame = -1

Query: 358 IDFATMIFDDMGLKDLISWNTMILGLTCNGKVAESLDLFKELLERGPPPDHVTMTGVLSA 179
           ID A  IFD M  K LISWN+MI+G + N    E+LDLF E+ + G   D  ++ GV+SA
Sbjct: 387 IDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISA 446

Query: 178 CNYGGFVDEGMSIFA 134
           C     ++ G  IFA
Sbjct: 447 CASISSLELGEQIFA 461


>ref|XP_002520264.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540483|gb|EEF42050.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 524

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/117 (57%), Positives = 93/117 (79%)
 Frame = -1

Query: 358 IDFATMIFDDMGLKDLISWNTMILGLTCNGKVAESLDLFKELLERGPPPDHVTMTGVLSA 179
           ID+A  IF  M ++DLISWNTMI+GLT NG+V E+LD FK+LL RGPPPD +T+ GVL A
Sbjct: 291 IDYAMDIFKSMTVRDLISWNTMIMGLTQNGRVIEALDAFKKLLNRGPPPDRITLAGVLLA 350

Query: 178 CNYGGFVDEGMSIFALMEKQYGVKPVGEHYVCVVDMMSRAGHLEEALNILETMPCEP 8
           C+YGGF++EGM+IF+ M+  YG+ P  EHY  +V+++ +AG L+EA++++E MP EP
Sbjct: 351 CSYGGFIEEGMTIFSSMQGSYGIIPSNEHYASIVNLLCQAGWLDEAMSMIEAMPSEP 407


>ref|XP_002306667.1| predicted protein [Populus trichocarpa] gi|222856116|gb|EEE93663.1|
           predicted protein [Populus trichocarpa]
          Length = 630

 Score =  147 bits (372), Expect = 7e-34
 Identities = 66/117 (56%), Positives = 90/117 (76%)
 Frame = -1

Query: 358 IDFATMIFDDMGLKDLISWNTMILGLTCNGKVAESLDLFKELLERGPPPDHVTMTGVLSA 179
           ID +  IF+ M  +DLI+WNTMI+GLT NG+V E+L  FKEL+  G PPD +T+ GVL A
Sbjct: 398 IDCSIKIFNKMVARDLIAWNTMIMGLTHNGRVFEALQTFKELIRTGLPPDRITLAGVLLA 457

Query: 178 CNYGGFVDEGMSIFALMEKQYGVKPVGEHYVCVVDMMSRAGHLEEALNILETMPCEP 8
           C++GGF+ EGM++F+ ME++YGVKP  EHY C VD++ +AG L+EAL + E+MP EP
Sbjct: 458 CSFGGFISEGMTVFSSMEERYGVKPSNEHYACFVDLLCQAGRLDEALYVAESMPYEP 514


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