BLASTX nr result

ID: Angelica23_contig00027329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00027329
         (1274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi...   393   e-107
ref|XP_002300622.1| chromatin remodeling complex subunit [Populu...   377   e-102
ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   375   e-101
ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   374   e-101
ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   350   3e-94

>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
            gi|297745602|emb|CBI40767.3| unnamed protein product
            [Vitis vinifera]
          Length = 492

 Score =  393 bits (1009), Expect = e-107
 Identities = 210/393 (53%), Positives = 264/393 (67%), Gaps = 6/393 (1%)
 Frame = -1

Query: 1163 PIAAAAVSS-----DSRPPDVILIPSYSRWFSWKNIHECELRNLPEFFEDSPASKNPKLY 999
            P+AA+A  S      +  P+ I IPSYSRWFSW N+HECE+R LPEFF+    SKNP++Y
Sbjct: 37   PVAASASPSVGIVPRASEPETINIPSYSRWFSWNNVHECEVRFLPEFFDARSPSKNPRVY 96

Query: 998  KYYRNSIIQRFRQTPTRKITFTEARKTIIGDVGSVRRVFDFLEAWGLINYFGAPSSKPQK 819
            KYYRNSII  FRQ P+RK+TFT+ RK ++GDVGS+RRVFDFLEAWGLINY G+   +P K
Sbjct: 97   KYYRNSIILSFRQNPSRKLTFTDVRKILVGDVGSIRRVFDFLEAWGLINYSGSALKQPLK 156

Query: 818  FEDKDASKSSNNQGTAGSAVIDGGGLPSGADSMASRKRMCGICKSVCSIACFAREKDDVT 639
            +E+KD     N  G A S   D GG   GA     ++R C  CKS+CSIACFA +K D+T
Sbjct: 157  WEEKD-----NKSGGASSHTGDAGG---GAVESIPKRRWCSGCKSLCSIACFACDKFDLT 208

Query: 638  LCARCFVRGSYKVGVGPSDFRRVEISDEEKTDWNDKETLHLLEAVMHYRDDWKKVAEHVS 459
            LCARC+VRG+Y+VGV  SDFRRVEIS++ K  W DKETLHLLEAV+HY DDWKKVAEHV 
Sbjct: 209  LCARCYVRGNYRVGVNSSDFRRVEISEDTKAGWTDKETLHLLEAVLHYGDDWKKVAEHVG 268

Query: 458  GRTARECVSQFVKLSFREQFIGPLDSAEVDDNINQSTGQSGIESVSQN-ATIPPAKKMRL 282
            GR  +ECV+ F+KLSF EQ++G   S +VD+  +Q+  QS      +N  T   +KKMRL
Sbjct: 269  GRNEKECVTHFIKLSFGEQYLGHTSSGDVDNKFSQAKDQSDAGFGQENIGTSSASKKMRL 328

Query: 281  NPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXXALYDDFNGTNFKEKVGSLMVGSTRH 102
             PL+DASNPIMAQAAFLSAL               +L  D +    KE +GS   G+ R 
Sbjct: 329  TPLSDASNPIMAQAAFLSALVGVEVAEAAARAAVASL-SDVDPRKMKEGLGSFANGA-RI 386

Query: 101  QEPCLASDSNAPVNSPVEAFDEARLQLIKEEAE 3
            Q+P + S+ N   N    A+ +A+  L +EE +
Sbjct: 387  QDPNVESNGNTTSNVLEGAYVDAKSLLEREELD 419


>ref|XP_002300622.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222842348|gb|EEE79895.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 500

 Score =  377 bits (967), Expect = e-102
 Identities = 206/410 (50%), Positives = 269/410 (65%), Gaps = 12/410 (2%)
 Frame = -1

Query: 1196 INSAVTTPFRPPIAAAAVSSDSRPP------DVILIPSYSRWFSWKNIHECELRNLPEFF 1035
            ++S V    +PP  AA      +PP      DV+ IPSYSRWFSW NIHECE+R LPEFF
Sbjct: 17   LSSTVKPEIQPPTTAAPSPRPPQPPPPSSEPDVVHIPSYSRWFSWDNIHECEVRFLPEFF 76

Query: 1034 EDSPASKNPKLYKYYRNSIIQRFRQTPTRKITFTEARKTIIGDVGSVRRVFDFLEAWGLI 855
            +    SKNP +YKYYRNSII +FR+ P+ K+TFTE RKT++GDVGS+RRVFDFL+AWGLI
Sbjct: 77   DSRSPSKNPSVYKYYRNSIISQFRKNPSAKLTFTEIRKTLVGDVGSIRRVFDFLDAWGLI 136

Query: 854  NYFGAPSSKPQKFEDKDASKSSNNQGTAGSAVIDGG--GLPSGADSMASRKRMCGICKSV 681
            NY  +P +K  K+ED   S S      AG    DGG  G  + +++  + KR+C  CKS+
Sbjct: 137  NY--SPLNKQLKWEDGKDSSSKTAASPAGGGGGDGGTAGDANASNTKDNCKRLCSGCKSL 194

Query: 680  CSIACFAREKDDVTLCARCFVRGSYKVGVGPSDFRRVEISDEEKTDWNDKETLHLLEAVM 501
            CSIACF  +K D+TLCARC+VRG+Y+VGV  SDFRRVEIS+E +TDW +KETL LLEAVM
Sbjct: 195  CSIACFFCDKYDITLCARCYVRGNYRVGVSSSDFRRVEISEEARTDWTEKETLQLLEAVM 254

Query: 500  HYRDDWKKVAEHVSGRTARECVSQFVKLSFREQFIGPLDSAEVDDNINQSTGQSGIES-V 324
            HYRDDWKKVA+HV GR+ ++C++ F+KL F E F    D  +VD   NQ       ES  
Sbjct: 255  HYRDDWKKVAQHVGGRSEKDCITHFIKLPFGEVFTDYTDVGDVDSKYNQIKDCDDDESGR 314

Query: 323  SQNATIPPAKKMRLNPLADASNPIMAQAAFLSALXXXXXXXXXXXXXXXALYD-DFNGTN 147
            + N +   +KK+RL+PL DASNPIMAQAAFLSAL                L + ++ G+ 
Sbjct: 315  NGNGSPSTSKKIRLSPLVDASNPIMAQAAFLSALAGTEVAEAAARAAVTTLTEVEYGGSK 374

Query: 146  FKEKVGSLMVGS--TRHQEPCLASDSNAPVNSPVEAFDEARLQLIKEEAE 3
                 GSL   S  T+H +  +AS+ +  +++ V+A  +A   L KEE++
Sbjct: 375  -----GSLEFVSRVTKHLDSGVASNGDTNLSASVKACLDANSLLEKEESD 419


>ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 493

 Score =  375 bits (962), Expect = e-101
 Identities = 187/309 (60%), Positives = 233/309 (75%), Gaps = 5/309 (1%)
 Frame = -1

Query: 1133 SRPPDVILIPSYSRWFSWKNIHECELRNLPEFFEDSPASKNPKLYKYYRNSIIQRFRQTP 954
            S  PD I +PSYSRWFSW  IHECE+R LPEFF+    SKNP++YKY RNSI++ FR+ P
Sbjct: 61   STSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 120

Query: 953  TRKITFTEARKTIIGDVGSVRRVFDFLEAWGLINYFGAPSSKPQKFEDKDASK--SSNNQ 780
            ++KITFT+ RKT++ DVGS+RRVFDFLEAWGLINY  +  SKP K++D+D+    S++N 
Sbjct: 121  SKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASASNT 180

Query: 779  GTAGSAVIDGGGLPSGADSMASRKRMCGICKSVCSIACFAREKDDVTLCARCFVRGSYKV 600
            G  G     GG   S A   AS KR+C  CKS+CSIACFA +K D+TLCARC+VRG+Y+V
Sbjct: 181  GEPG-----GGSANSSAPKDAS-KRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRV 234

Query: 599  GVGPSDFRRVEISDEEKTDWNDKETLHLLEAVMHYRDDWKKVAEHVSGRTARECVSQFVK 420
            GV  SDFRRVEI+D+ +TDW DKETLHLLEA+ HY DDWKKVA+HV GRT RECV+QFVK
Sbjct: 235  GVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVK 294

Query: 419  LSFREQFIGPLDSAEVDDNI---NQSTGQSGIESVSQNATIPPAKKMRLNPLADASNPIM 249
            L   EQF G  DS  +D+N    ++++    +ES  +  T  P K++RL+PLADASNPIM
Sbjct: 295  LPLGEQFHGYPDSEHIDNNCTVKDEASANLTLESTGKIGTSIPNKRIRLSPLADASNPIM 354

Query: 248  AQAAFLSAL 222
            AQAAFLS+L
Sbjct: 355  AQAAFLSSL 363


>ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 555

 Score =  374 bits (961), Expect = e-101
 Identities = 187/309 (60%), Positives = 233/309 (75%), Gaps = 5/309 (1%)
 Frame = -1

Query: 1133 SRPPDVILIPSYSRWFSWKNIHECELRNLPEFFEDSPASKNPKLYKYYRNSIIQRFRQTP 954
            S  PD I +PSYSRWFSW  IHECE+R LPEFF+    SKNP++YKY RNSI++ FR+ P
Sbjct: 123  STSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 182

Query: 953  TRKITFTEARKTIIGDVGSVRRVFDFLEAWGLINYFGAPSSKPQKFEDKDASK--SSNNQ 780
            ++KITFT+ RKT++ DVGS+RRVFDFLEAWGLINY  +  SKP K++D+D+    S++N 
Sbjct: 183  SKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASASNT 242

Query: 779  GTAGSAVIDGGGLPSGADSMASRKRMCGICKSVCSIACFAREKDDVTLCARCFVRGSYKV 600
            G  G     GG   S A   AS KR+C  CKS+CSIACFA +K D+TLCARC+VRG+Y+V
Sbjct: 243  GEPG-----GGSANSSAPKDAS-KRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRV 296

Query: 599  GVGPSDFRRVEISDEEKTDWNDKETLHLLEAVMHYRDDWKKVAEHVSGRTARECVSQFVK 420
            GV  SDFRRVEI+D+ +TDW DKETLHLLEA+ HY DDWKKVA+HV GRT RECV+QFVK
Sbjct: 297  GVSSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVK 356

Query: 419  LSFREQFIGPLDSAEVDDNI---NQSTGQSGIESVSQNATIPPAKKMRLNPLADASNPIM 249
            L   EQF G  DS  +D+N    ++++    +ES  +  T  P K++RL+PLADASNPIM
Sbjct: 357  LPLGEQFHGYPDSEHIDNNCTVKDEASANLMLESTGKIGTSIPNKRIRLSPLADASNPIM 416

Query: 248  AQAAFLSAL 222
            AQAAFLS+L
Sbjct: 417  AQAAFLSSL 425


>ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 491

 Score =  350 bits (899), Expect = 3e-94
 Identities = 185/336 (55%), Positives = 238/336 (70%), Gaps = 18/336 (5%)
 Frame = -1

Query: 1175 PFRPPIAAAAVS-----SDSRPP---DVILIPSYSRWFSWKNIHECELRNLPEFFEDSPA 1020
            P +P  AA+AV      SDS+     +VI++PSYSRWFSW +I ECE+R+LPEFFE   A
Sbjct: 25   PPQPVAAASAVKPEAPLSDSKASAEANVIVVPSYSRWFSWDSIDECEVRHLPEFFES--A 82

Query: 1019 SKNPKLYKYYRNSIIQRFRQTPTRKITFTEARKTIIGDVGSVRRVFDFLEAWGLINYFGA 840
            SK+P++YKYYRNSI++ FR  PTRKITFT+ RKT++GDVGS+RRVFDFLE WGLINY  +
Sbjct: 83   SKSPRVYKYYRNSIVKYFRYNPTRKITFTDVRKTLVGDVGSIRRVFDFLETWGLINYHPS 142

Query: 839  PS-SKPQKFEDKDASKSSNNQGTAGSAVIDGGGLPSGADSMASRKRMCGICKSVCSIACF 663
             S +KP K++DK+    S +  T  S+          A +  + KR+C  CK VC+IACF
Sbjct: 143  SSLTKPLKWDDKETKSDSASNTTESSS----------APAKENTKRLCSGCKVVCTIACF 192

Query: 662  AREKDDVTLCARCFVRGSYKVGVGPSDFRRVEISDEEKTDWNDKETLHLLEAVMHYRDDW 483
            A +K D+TLCARC+VRG+Y+VGV  SDFRRVEIS+E KTDWN+KET +LLEA+ HY DDW
Sbjct: 193  ACDKYDLTLCARCYVRGNYRVGVNSSDFRRVEISEETKTDWNEKETTNLLEAITHYSDDW 252

Query: 482  KKVAEHVSGRTARECVSQFVKLSFREQF---------IGPLDSAEVDDNINQSTGQSGIE 330
            K+V++HV GRT +ECV+ F+KL F +QF          G  DS      +  +  +S ++
Sbjct: 253  KRVSQHVPGRTEKECVAHFLKLPFVDQFQHYQQHPAVNGTDDSCNPLKRVTNADAESELD 312

Query: 329  SVSQNATIPPAKKMRLNPLADASNPIMAQAAFLSAL 222
            +V   A+  P K+MRL PLADASNPIMAQAAFLSAL
Sbjct: 313  TV---ASAEPNKRMRLTPLADASNPIMAQAAFLSAL 345


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