BLASTX nr result

ID: Angelica23_contig00027256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00027256
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containi...   155   3e-36
ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|2...   154   6e-36
ref|XP_003619016.1| Pentatricopeptide repeat-containing protein ...   149   3e-34
ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
emb|CBI29931.3| unnamed protein product [Vitis vinifera]              141   5e-32

>ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 989

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/86 (86%), Positives = 79/86 (91%)
 Frame = -2

Query: 258  ILGRSGFLARARKFIEEMPIEPDAMAWRTLLSACTAHKNIEIGEFAARHLLELEPEDSAT 79
            +LGR+  L  AR+FIEEMPIEPDAM WRTLLSACT HKNIEIGEFAARHLLELEPEDSAT
Sbjct: 763  LLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSAT 822

Query: 78   YVLLSNMYAVSGKWDYRDHTRQLMKN 1
            YVLLSNMYAVSGKWDYRD TRQ+MK+
Sbjct: 823  YVLLSNMYAVSGKWDYRDRTRQMMKD 848


>ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|222857540|gb|EEE95087.1|
            predicted protein [Populus trichocarpa]
          Length = 989

 Score =  154 bits (390), Expect = 6e-36
 Identities = 71/86 (82%), Positives = 80/86 (93%)
 Frame = -2

Query: 258  ILGRSGFLARARKFIEEMPIEPDAMAWRTLLSACTAHKNIEIGEFAARHLLELEPEDSAT 79
            ++ R+GFL+RARKFIEEMPIEPDA  WRTLLSACT HKN+E+GEFAA+HLLELEPEDSAT
Sbjct: 763  LISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSAT 822

Query: 78   YVLLSNMYAVSGKWDYRDHTRQLMKN 1
            YVLLSNMYAVSGKWD RD TRQ+M+N
Sbjct: 823  YVLLSNMYAVSGKWDCRDQTRQMMRN 848


>ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355494031|gb|AES75234.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/86 (79%), Positives = 79/86 (91%)
 Frame = -2

Query: 258  ILGRSGFLARARKFIEEMPIEPDAMAWRTLLSACTAHKNIEIGEFAARHLLELEPEDSAT 79
            +LGRSG L+RA++F+EEMPI+PDAM WRTLLSAC  HKNI+IGEFAA HLLELEP+DSAT
Sbjct: 773  LLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSAT 832

Query: 78   YVLLSNMYAVSGKWDYRDHTRQLMKN 1
            YVL+SNMYAVSGKWD RD TRQ+MK+
Sbjct: 833  YVLVSNMYAVSGKWDCRDRTRQMMKD 858


>ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/86 (77%), Positives = 77/86 (89%)
 Frame = -2

Query: 258  ILGRSGFLARARKFIEEMPIEPDAMAWRTLLSACTAHKNIEIGEFAARHLLELEPEDSAT 79
            +LGRSG L+RAR+F+EEMPI+PDAM  RTLLSAC  HKNI+IGEFAA HLLELEP+DSAT
Sbjct: 821  LLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSAT 880

Query: 78   YVLLSNMYAVSGKWDYRDHTRQLMKN 1
            YVLLSNMYAV+GKW  RD TRQ+MK+
Sbjct: 881  YVLLSNMYAVTGKWGCRDRTRQMMKD 906


>emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/81 (82%), Positives = 71/81 (87%)
 Frame = -2

Query: 243 GFLARARKFIEEMPIEPDAMAWRTLLSACTAHKNIEIGEFAARHLLELEPEDSATYVLLS 64
           G +     F+ EMPIEPDAM WRTLLSACT HKNIEIGEFAARHLLELEPEDSATYVLLS
Sbjct: 617 GLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLS 676

Query: 63  NMYAVSGKWDYRDHTRQLMKN 1
           NMYAVSGKWDYRD TRQ+MK+
Sbjct: 677 NMYAVSGKWDYRDRTRQMMKD 697


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