BLASTX nr result

ID: Angelica23_contig00027198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00027198
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519901.1| pentatricopeptide repeat-containing protein,...    60   2e-07
ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat...    60   3e-07
ref|XP_002309564.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-07
ref|XP_002338159.1| predicted protein [Populus trichocarpa] gi|2...    59   8e-07
ref|XP_002336216.1| predicted protein [Populus trichocarpa] gi|2...    59   8e-07

>ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540947|gb|EEF42505.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 777

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/93 (38%), Positives = 51/93 (54%)
 Frame = -3

Query: 578 PDVLTYEIMINGYCNQSDVVNTLLLFQEMVDRKIAVSCALYEVVIRALCSCGSLREALKY 399
           PD  TY IMI+GYC  + V     LFQEMV  KI  +  +Y  +IRA C  G++REA + 
Sbjct: 545 PDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRL 604

Query: 398 LNNMVESGNIVSSMRWKTFFSSTFASLEHSSSS 300
            ++M   G   +        S+T++SL H  S+
Sbjct: 605 RDDMRSRGIPQT--------SATYSSLIHGLSN 629


>ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 26/70 (37%), Positives = 40/70 (57%)
 Frame = -3

Query: 578 PDVLTYEIMINGYCNQSDVVNTLLLFQEMVDRKIAVSCALYEVVIRALCSCGSLREALKY 399
           P+V++Y  +INGYC    +   + LF+EM  R++  +   Y  +I  LC  G LR+A+  
Sbjct: 352 PNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIAL 411

Query: 398 LNNMVESGNI 369
            + MV SG I
Sbjct: 412 FHEMVASGQI 421


>ref|XP_002309564.1| predicted protein [Populus trichocarpa] gi|222855540|gb|EEE93087.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 28/70 (40%), Positives = 38/70 (54%)
 Frame = -3

Query: 578 PDVLTYEIMINGYCNQSDVVNTLLLFQEMVDRKIAVSCALYEVVIRALCSCGSLREALKY 399
           PDV +Y I+INGYC    +     LF EM+ + +  +   Y  +I  LC  GSLREA   
Sbjct: 376 PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNL 435

Query: 398 LNNMVESGNI 369
             NM  +GN+
Sbjct: 436 FKNMHTNGNL 445


>ref|XP_002338159.1| predicted protein [Populus trichocarpa] gi|222871069|gb|EEF08200.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 27/70 (38%), Positives = 37/70 (52%)
 Frame = -3

Query: 578 PDVLTYEIMINGYCNQSDVVNTLLLFQEMVDRKIAVSCALYEVVIRALCSCGSLREALKY 399
           PDV +Y I+INGYC    +     LF EM+ + +      Y  +I  LC  G LREA   
Sbjct: 183 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 242

Query: 398 LNNMVESGNI 369
             NM+ +GN+
Sbjct: 243 FKNMLTNGNL 252


>ref|XP_002336216.1| predicted protein [Populus trichocarpa] gi|222832672|gb|EEE71149.1|
           predicted protein [Populus trichocarpa]
          Length = 616

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 27/70 (38%), Positives = 37/70 (52%)
 Frame = -3

Query: 578 PDVLTYEIMINGYCNQSDVVNTLLLFQEMVDRKIAVSCALYEVVIRALCSCGSLREALKY 399
           PDV +Y I+INGYC    +     LF EM+ + +      Y  +I  LC  G LREA   
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 459

Query: 398 LNNMVESGNI 369
             NM+ +GN+
Sbjct: 460 FKNMLTNGNL 469


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