BLASTX nr result
ID: Angelica23_contig00027197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00027197
(511 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containi... 74 9e-12
ref|XP_003591979.1| Pentatricopeptide repeat-containing protein ... 70 2e-10
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,... 69 4e-10
ref|NP_190938.1| pentatricopeptide repeat-containing protein [Ar... 69 5e-10
ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arab... 68 9e-10
>ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 74.3 bits (181), Expect = 9e-12
Identities = 42/163 (25%), Positives = 81/163 (49%)
Frame = +2
Query: 8 VGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRT 187
+ G KL ++E +++ Q+ S D PN + + + SLC R+DEA + + + +
Sbjct: 350 ISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGI 409
Query: 188 VPEICVYGSFIKALFVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVR 367
+P++C + S I+ L ++ K A+ F+ K KG + + +I LC + KL+EA+
Sbjct: 410 LPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALN 469
Query: 368 FFNETAAAFGRFANCSNVCNCILNRYWTENRLAEAEYLFRRLK 496
E A + N +++ + R+ EAE +F ++
Sbjct: 470 LLKE--MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 510
>ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 873
Score = 69.7 bits (169), Expect = 2e-10
Identities = 44/155 (28%), Positives = 75/155 (48%)
Frame = +2
Query: 8 VGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRT 187
V GY KL +LKE VI + + +P++ + + R LCD G++DEA + KM + +
Sbjct: 288 VHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKL 347
Query: 188 VPEICVYGSFIKALFVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVR 367
VP++ Y + I F A + + K +G+ + + +I C GK+DEA
Sbjct: 348 VPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASN 407
Query: 368 FFNETAAAFGRFANCSNVCNCILNRYWTENRLAEA 472
+ + G +C N ++N Y ++AEA
Sbjct: 408 VMVKMVES-GFSPDCFTY-NTMINGYCKAGKMAEA 440
>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 874
Score = 68.9 bits (167), Expect = 4e-10
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Frame = +2
Query: 14 GYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVP 193
G+ K L+E + ++ +K N N+ ++ + L G+L EA +VLK+M+ P
Sbjct: 300 GFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEP 359
Query: 194 EICVYGSFIKALFVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFF 373
+I Y + L DA + + G++ S ++ G C GK+ EA
Sbjct: 360 DIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLL 419
Query: 374 NETAAAFGRFANCS---NVCNCILNRYWTENRLAEAEYLFRRLKDSNYG 511
+E + NCS CN +L+ W E R++EAE L +++ + YG
Sbjct: 420 HEMIS-----NNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYG 463
Score = 55.8 bits (133), Expect = 3e-06
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Frame = +2
Query: 8 VGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRT 187
V GY + +G ++ Q+++ +PN + + + S C G+ +AE ++ KM
Sbjct: 189 VRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGL 248
Query: 188 VPEICVYGSFIKALFVADRDKDAIRFF---QVEKKKGLVKVDEIA-SYVIMGLCQNGKLD 355
VP + + S I AL + + +A R F Q++++ GL + I ++MG C+ G L+
Sbjct: 249 VPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLE 308
Query: 356 EA 361
EA
Sbjct: 309 EA 310
>ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis
thaliana] gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400
[Arabidopsis thaliana] gi|332645608|gb|AEE79129.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 754
Score = 68.6 bits (166), Expect = 5e-10
Identities = 39/166 (23%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Frame = +2
Query: 8 VGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRT 187
+ G KL +KE V+ Q+ + D PN + + + +LC +++EA + + + +
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 188 VPEICVYGSFIKALFVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVR 367
+P++C + S I+ L + + A+ F+ + KG + + +I LC GKLDEA+
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 368 FFNETAAAFGRFANCSN---VCNCILNRYWTENRLAEAEYLFRRLK 496
+ + C+ N +++ + N+ EAE +F ++
Sbjct: 457 MLKQM-----ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
>ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata] gi|297322059|gb|EFH52480.1| hypothetical protein
ARALYDRAFT_906766 [Arabidopsis lyrata subsp. lyrata]
Length = 754
Score = 67.8 bits (164), Expect = 9e-10
Identities = 38/166 (22%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Frame = +2
Query: 8 VGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRT 187
+ G KL +KE + Q+ + D PN + + + +LC +++EA + + + +
Sbjct: 337 ISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 188 VPEICVYGSFIKALFVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVR 367
+P++C + S I+ L + + A+ F+ + KG + + +I LC GKLDEA+
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 368 FFNETAAAFGRFANCSN---VCNCILNRYWTENRLAEAEYLFRRLK 496
+ + C+ N +++ + N++ EAE +F ++
Sbjct: 457 MLKQM-----ELSGCARSVITYNTLIDGFCKANKIREAEEIFDEME 497