BLASTX nr result

ID: Angelica23_contig00027193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00027193
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADJ57934.1| ribosomal protein large subunit 16 [Solanum torvum]    150   1e-34
gb|ABU85174.1| ribosomal protein L16 [Anethum graveolens]             147   1e-33
ref|YP_588155.1| ribosomal protein L16 [Helianthus annuus] gi|18...   141   7e-32
gb|ABD47270.1| ribosomal protein L16 [Lactuca sativa]                 141   7e-32
ref|YP_004769752.1| ribosomal protein L16 [Magnolia kwangsiensis...   140   9e-32

>gb|ADJ57934.1| ribosomal protein large subunit 16 [Solanum torvum]
          Length = 140

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/74 (97%), Positives = 72/74 (97%)
 Frame = +3

Query: 306 SEPTINYNPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMT 485
           SEPTINYNPKRTRFRKQHRGRMKGIS RGN ISFGKYALQALEPAWITSRQIEAGRRAMT
Sbjct: 2   SEPTINYNPKRTRFRKQHRGRMKGISIRGNRISFGKYALQALEPAWITSRQIEAGRRAMT 61

Query: 486 RNARRGGKIWVRIF 527
           RNARRGGKIWVRIF
Sbjct: 62  RNARRGGKIWVRIF 75


>gb|ABU85174.1| ribosomal protein L16 [Anethum graveolens]
          Length = 136

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/70 (98%), Positives = 70/70 (100%)
 Frame = +3

Query: 318 INYNPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNAR 497
           +NYNPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNAR
Sbjct: 1   MNYNPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNAR 60

Query: 498 RGGKIWVRIF 527
           RGGKIWVRIF
Sbjct: 61  RGGKIWVRIF 70


>ref|YP_588155.1| ribosomal protein L16 [Helianthus annuus]
           gi|183217778|ref|YP_001837398.1| ribosomal protein L16
           [Guizotia abyssinica] gi|441403331|ref|YP_007353804.1|
           ribosomal protein L16 (chloroplast) [Chrysanthemum x
           morifolium] gi|452849089|ref|YP_007474767.1| ribosomal
           protein L16 (chloroplast) [Chrysanthemum indicum]
           gi|115502622|sp|Q1KXS1.1|RK16_HELAN RecName: Full=50S
           ribosomal protein L16, chloroplastic
           gi|215275566|sp|B2LMN1.1|RK16_GUIAB RecName: Full=50S
           ribosomal protein L16, chloroplastic
           gi|88656932|gb|ABD47183.1| ribosomal protein L16
           [Helianthus annuus] gi|179366293|gb|ACB86564.1|
           ribosomal protein L16 [Guizotia abyssinica]
           gi|372863244|gb|AEX99316.1| ribosomal protein L16
           (chloroplast) [Chrysanthemum indicum]
           gi|372863483|gb|AEX99552.1| ribosomal protein L16
           (chloroplast) [Chrysanthemum indicum]
           gi|375298874|gb|AFA45313.1| ribosomal protein L16
           (chloroplast) [Chrysanthemum x morifolium]
          Length = 136

 Score =  141 bits (355), Expect = 7e-32
 Identities = 67/70 (95%), Positives = 68/70 (97%)
 Frame = +3

Query: 318 INYNPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNAR 497
           +NYNPKRTRFRKQHRGRMKGISYRGN I FGKYALQALEPAWITSRQIEAGRRAMTRNAR
Sbjct: 1   MNYNPKRTRFRKQHRGRMKGISYRGNTICFGKYALQALEPAWITSRQIEAGRRAMTRNAR 60

Query: 498 RGGKIWVRIF 527
           RGGKIWVRIF
Sbjct: 61  RGGKIWVRIF 70


>gb|ABD47270.1| ribosomal protein L16 [Lactuca sativa]
          Length = 136

 Score =  141 bits (355), Expect = 7e-32
 Identities = 67/70 (95%), Positives = 68/70 (97%)
 Frame = +3

Query: 318 INYNPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNAR 497
           +NYNPKRTRFRKQHRGRMKGISYRGN I FGKYALQALEPAWITSRQIEAGRRAMTRNAR
Sbjct: 1   MNYNPKRTRFRKQHRGRMKGISYRGNAICFGKYALQALEPAWITSRQIEAGRRAMTRNAR 60

Query: 498 RGGKIWVRIF 527
           RGGKIWVRIF
Sbjct: 61  RGGKIWVRIF 70


>ref|YP_004769752.1| ribosomal protein L16 [Magnolia kwangsiensis]
           gi|400256625|ref|YP_006576152.1| ribosomal protein L16
           (chloroplast) [Magnolia denudata]
           gi|452848726|ref|YP_007474408.1| ribosomal protein L16
           (chloroplast) [Magnolia officinalis]
           gi|452848809|ref|YP_007474490.1| ribosomal protein L16
           (chloroplast) [Magnolia officinalis subsp. biloba]
           gi|452848894|ref|YP_007474574.1| ribosomal protein L16
           (chloroplast) [Magnolia grandiflora]
           gi|302424218|gb|ADL39094.1| ribosomal protein L16
           [Magnolia kwangsiensis] gi|343887576|gb|AEM65255.1|
           ribosomal protein L16 [Magnolia denudata]
           gi|372862205|gb|AEX98289.1| ribosomal protein L16
           (chloroplast) [Magnolia liliiflora]
           gi|372862289|gb|AEX98372.1| ribosomal protein L16
           (chloroplast) [Magnolia denudata]
           gi|372862459|gb|AEX98540.1| ribosomal protein L16
           (chloroplast) [Magnolia officinalis]
           gi|372862542|gb|AEX98622.1| ribosomal protein L16
           (chloroplast) [Magnolia officinalis subsp. biloba]
           gi|372862627|gb|AEX98706.1| ribosomal protein L16
           (chloroplast) [Magnolia officinalis subsp. biloba]
           gi|372862712|gb|AEX98790.1| ribosomal protein L16
           (chloroplast) [Magnolia officinalis subsp. biloba]
           gi|372862881|gb|AEX98957.1| ribosomal protein L16
           (chloroplast) [Magnolia grandiflora]
           gi|372863051|gb|AEX99125.1| ribosomal protein L16
           (chloroplast) [Magnolia grandiflora]
          Length = 136

 Score =  140 bits (354), Expect = 9e-32
 Identities = 66/70 (94%), Positives = 68/70 (97%)
 Frame = +3

Query: 318 INYNPKRTRFRKQHRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNAR 497
           +NYNPKRTRFRKQHRGRMKGISYRGNHI FG+YALQALEPAWITSRQIEAGRRAMTR AR
Sbjct: 1   MNYNPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRYAR 60

Query: 498 RGGKIWVRIF 527
           RGGKIWVRIF
Sbjct: 61  RGGKIWVRIF 70


Top