BLASTX nr result

ID: Angelica23_contig00027192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00027192
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513759.1| DNA double-strand break repair rad50 ATPase,...    60   1e-07
ref|XP_003634406.1| PREDICTED: filament-like plant protein-like ...    59   5e-07
ref|XP_002302234.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002513759.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus
           communis] gi|223546845|gb|EEF48342.1| DNA double-strand
           break repair rad50 ATPase, putative [Ricinus communis]
          Length = 711

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/86 (41%), Positives = 54/86 (62%)
 Frame = +2

Query: 2   FLEMERLAALPEAKSKTCAIGSEFVACQTNTTESSLRAELKATGQCVTELEDNLQQIKAE 181
           FLEMERLAALPE KS T     E VA  +  +ESSLRAEL+       ELE+ LQ+++ E
Sbjct: 332 FLEMERLAALPETKSGTLNSKPEAVAKPSTDSESSLRAELEIMINRTAELEEKLQKMEGE 391

Query: 182 KESIACRAKDIEHKLRVELDTTTQRV 259
           K  +  + + +E + +++L+   Q++
Sbjct: 392 KLKLEAKLQKMEGE-KLDLEANLQKM 416


>ref|XP_003634406.1| PREDICTED: filament-like plant protein-like [Vitis vinifera]
          Length = 624

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 17/110 (15%)
 Frame = +2

Query: 2   FLEMERLAALPEAKSKTCAIGSEFVACQTNTTESSLRAELKATGQCVTELEDNLQQIKAE 181
           FLEMERLAALP+A+  + ++ S+ V  QT+  +SSLRAEL+     + ELE+ L++++AE
Sbjct: 316 FLEMERLAALPQAEHGSRSLESQAVTNQTSNEDSSLRAELETMTHRMAELEEKLEKMEAE 375

Query: 182 K--------------ESIACRAKDIEHKL---RVELDTTTQRVAVLEDKL 280
           K              E+   + ++ E KL   + ELD   +    LE +L
Sbjct: 376 KAELEIALTVSQDCIEASKIQLREAEMKLEEMQKELDFANESKQALESQL 425


>ref|XP_002302234.1| predicted protein [Populus trichocarpa] gi|222843960|gb|EEE81507.1|
           predicted protein [Populus trichocarpa]
          Length = 696

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/93 (37%), Positives = 56/93 (60%)
 Frame = +2

Query: 2   FLEMERLAALPEAKSKTCAIGSEFVACQTNTTESSLRAELKATGQCVTELEDNLQQIKAE 181
           FLEME+LAAL E ++ T    +E V  Q+   ESSLRAEL+   +   ELE+ LQ+++ E
Sbjct: 360 FLEMEQLAALSENETGTDNSKAEAVIKQSVDAESSLRAELEVMAKRTAELEEKLQKVEGE 419

Query: 182 KESIACRAKDIEHKLRVELDTTTQRVAVLEDKL 280
           K  +  + + +E + + EL+   +R+    D+L
Sbjct: 420 KFELEEKLQKVEGE-KFELEEKLERIKAEMDEL 451


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