BLASTX nr result
ID: Angelica23_contig00027164
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00027164
(303 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera] 153 1e-35
ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containi... 153 2e-35
ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containi... 145 3e-33
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 125 3e-27
ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [S... 124 1e-26
>emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 153 bits (387), Expect = 1e-35
Identities = 70/100 (70%), Positives = 84/100 (84%)
Frame = +1
Query: 1 AWKCFDGMLEKNIATWNAMICGLAAHGYAKEAISLFGELKKEGVVPNDITFVGVLSACCH 180
A K FD + E+N ATWNAMICGLA HG+AKEA+ F +L+KE +VPNDITFVGVLSACCH
Sbjct: 283 AQKLFDXISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSACCH 342
Query: 181 AGLLDFGREMFELMSKVYAIEPRIEHYGCLVNLLGRAGKL 300
AGLL GR++F LM +VY IEP+IEHYGC+V+LLGR G+L
Sbjct: 343 AGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGEL 382
Score = 58.9 bits (141), Expect = 4e-07
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = +1
Query: 1 AWKCFDGMLEKNIATWNAMICGLAAHGYAKEAISLFGELKKEGVVPNDITFVGVLSACCH 180
A + FD + E++++ W MI G A + + EA+ LF ++ EG+ PN T VLSAC
Sbjct: 182 ARRVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLASVLSACAQ 241
Query: 181 AGLLDFGREMFELMSK 228
+G LD G + M +
Sbjct: 242 SGCLDLGERIHVFMEE 257
>ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 153 bits (386), Expect = 2e-35
Identities = 70/100 (70%), Positives = 84/100 (84%)
Frame = +1
Query: 1 AWKCFDGMLEKNIATWNAMICGLAAHGYAKEAISLFGELKKEGVVPNDITFVGVLSACCH 180
A K FD + E+N ATWNAMICGLA HG+AKEA+ F +L+KE +VPNDITFVGVLSACCH
Sbjct: 281 AQKLFDTISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSACCH 340
Query: 181 AGLLDFGREMFELMSKVYAIEPRIEHYGCLVNLLGRAGKL 300
AGLL GR++F LM +VY IEP+IEHYGC+V+LLGR G+L
Sbjct: 341 AGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGEL 380
Score = 58.9 bits (141), Expect = 4e-07
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = +1
Query: 1 AWKCFDGMLEKNIATWNAMICGLAAHGYAKEAISLFGELKKEGVVPNDITFVGVLSACCH 180
A + FD + E++++ W MI G A + + EA+ LF ++ EG+ PN T VLSAC
Sbjct: 180 ARRVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLASVLSACAQ 239
Query: 181 AGLLDFGREMFELMSK 228
+G LD G + M +
Sbjct: 240 SGCLDLGERIHVFMEE 255
>ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 465
Score = 145 bits (366), Expect = 3e-33
Identities = 68/101 (67%), Positives = 81/101 (80%), Gaps = 1/101 (0%)
Frame = +1
Query: 1 AWKCFDGMLEKNIATWNAMICGLAAHGYAKEAISLFGELKKEGVV-PNDITFVGVLSACC 177
A + FD M E+N+ TWNAMICGL A+GY +A+ LF ++KKEGVV PN +TFVGVLSACC
Sbjct: 273 ARRLFDEMPERNVVTWNAMICGLGAYGYVDDALGLFEKMKKEGVVVPNGVTFVGVLSACC 332
Query: 178 HAGLLDFGREMFELMSKVYAIEPRIEHYGCLVNLLGRAGKL 300
HAGL+D GRE+F M VY IEP+IEHYGCLV+LLGR G L
Sbjct: 333 HAGLIDVGREIFRSMKSVYGIEPKIEHYGCLVDLLGRGGWL 373
Score = 56.2 bits (134), Expect = 3e-06
Identities = 28/74 (37%), Positives = 39/74 (52%)
Frame = +1
Query: 1 AWKCFDGMLEKNIATWNAMICGLAAHGYAKEAISLFGELKKEGVVPNDITFVGVLSACCH 180
A + FD EK + W M+CG A + + EA+ LF ++ EG P T VLSAC
Sbjct: 170 ARQVFDETPEKISSLWTTMVCGYAQNFCSNEALRLFEDMVGEGFEPGGATLASVLSACAR 229
Query: 181 AGLLDFGREMFELM 222
+G L+ G + E M
Sbjct: 230 SGCLELGERIHEFM 243
>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 125 bits (315), Expect = 3e-27
Identities = 55/98 (56%), Positives = 75/98 (76%)
Frame = +1
Query: 1 AWKCFDGMLEKNIATWNAMICGLAAHGYAKEAISLFGELKKEGVVPNDITFVGVLSACCH 180
A + FDGM K++A+WNAMICGLA HG A +A LF ++ +G+ PN+ITFVG+LSAC H
Sbjct: 416 ARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKH 475
Query: 181 AGLLDFGREMFELMSKVYAIEPRIEHYGCLVNLLGRAG 294
AGL+D G++ F M + Y I P+ +HYGC+++LLGRAG
Sbjct: 476 AGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAG 513
Score = 67.8 bits (164), Expect = 9e-10
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +1
Query: 1 AWKCFDGMLEKNIATWNAMICGLAAHGYAKEAISLFGELKKEGVVPNDITFVGVLSACCH 180
A + FD M K++ +WNAMI G A G +KEA+ LF +++K V PN+ T V VLSAC
Sbjct: 214 ARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQ 273
Query: 181 AGLLDFGREM 210
+ LD G M
Sbjct: 274 SNALDLGNSM 283
Score = 65.1 bits (157), Expect = 6e-09
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = +1
Query: 1 AWKCFDGMLEKNIATWNAMICGLAAHGYAKEAISLFGELKKEGVVPNDITFVGVLSACCH 180
A + FD MLE+++ +WN MI G KEA++LF E+ GV P +ITF+ +L +C H
Sbjct: 315 ARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAH 374
Query: 181 AGLLDFGREMFELMSK 228
G +D G+ + ++K
Sbjct: 375 LGAIDLGKWIHAYINK 390
>ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein
SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 124 bits (310), Expect = 1e-26
Identities = 51/95 (53%), Positives = 78/95 (82%)
Frame = +1
Query: 19 GMLEKNIATWNAMICGLAAHGYAKEAISLFGELKKEGVVPNDITFVGVLSACCHAGLLDF 198
G +++I WNAM+ G A HG+++EA++ FG+L+ +G+ P DITF+GVL+AC H+GL+D
Sbjct: 324 GAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDE 383
Query: 199 GREMFELMSKVYAIEPRIEHYGCLVNLLGRAGKLK 303
GRE+F M++ Y IEP++EHYGC+V+LLGRAG+++
Sbjct: 384 GRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVE 418