BLASTX nr result

ID: Angelica23_contig00027147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00027147
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi...   216   4e-54
ref|XP_002334199.1| predicted protein [Populus trichocarpa] gi|2...   189   5e-46
ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|2...   184   3e-44
ref|XP_002525196.1| pentatricopeptide repeat-containing protein,...   175   1e-41
ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containi...   174   2e-41

>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic [Vitis vinifera]
            gi|297741486|emb|CBI32618.3| unnamed protein product
            [Vitis vinifera]
          Length = 842

 Score =  216 bits (551), Expect = 4e-54
 Identities = 121/206 (58%), Positives = 155/206 (75%), Gaps = 12/206 (5%)
 Frame = -3

Query: 825  YNANDYYLKQLIEEWCEGILQGNNQNRVQPTSSSRTDLGGSQSLLLEKVAANLQKTGSES 646
            Y +NDYYLK+LIEEWCEG++Q NN N+ + +S +R D G  QSLLLEKVAA+LQK+ +ES
Sbjct: 638  YKSNDYYLKELIEEWCEGVIQDNNLNQSKFSSVNRADWGRPQSLLLEKVAAHLQKSVAES 697

Query: 645  LAVDLRGLTKVEARIVVLAVLRMIKENYTPGNSLKDDMSIILGVQEVGSSDAKHDS-VKD 469
            LA+DL+GLT+VEARIVVLAVLRMIKENY  G+ +KDD+ IILG+++V ++  +H+S VK 
Sbjct: 698  LAIDLQGLTQVEARIVVLAVLRMIKENYILGHPIKDDILIILGIKKVDANLVEHESPVKG 757

Query: 468  AIVKLLQDDLGLEVIFAATASITLN----------SDADFKNTFAVG-FPTQLESPTRRP 322
            AI+KLLQD+LGLEV FA    I L+          SD D++        PT+LES TRRP
Sbjct: 758  AIIKLLQDELGLEVAFAG-PKIALDKRINLGGPPGSDPDWQEALGRNRLPTELESSTRRP 816

Query: 321  ADLHRLKVTRKSLYNWLQKRLGASTG 244
            A L R KVTRKSL +WLQ+R+GA+ G
Sbjct: 817  AVLQRFKVTRKSLDHWLQRRVGATRG 842


>ref|XP_002334199.1| predicted protein [Populus trichocarpa] gi|222870080|gb|EEF07211.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  189 bits (481), Expect = 5e-46
 Identities = 109/200 (54%), Positives = 140/200 (70%), Gaps = 9/200 (4%)
 Frame = -3

Query: 825 YNANDYYLKQLIEEWCEGILQGNNQNRVQPTSSSRTDLGGSQSLLLEKVAANLQKTGSES 646
           Y +NDYYLKQLIEEWCEG++Q NNQ +    S  RTDLG  +SLLLEKVAA+LQ   SE+
Sbjct: 14  YKSNDYYLKQLIEEWCEGVIQDNNQIQGGFASCKRTDLGRPRSLLLEKVAAHLQNNISEN 73

Query: 645 LAVDLRGLTKVEARIVVLAVLRMIKENYTPGNSLKDDMSIILGVQEVGSSDAKHDSVKDA 466
           LA+DL+GLTKVEARIVVLAVLRMIKENYT G S+K+DM I L V +V  +  +   VK+A
Sbjct: 74  LAIDLQGLTKVEARIVVLAVLRMIKENYTLGYSVKEDMWITLDVSKVDPASKRDSEVKNA 133

Query: 465 IVKLLQDDLGLEVIFAATASITLNSDADFKNTFAVG--------FPTQLESPTRRPADL- 313
           I++LL+++LGLEV+ A    +  +   D K++   G           ++ S TRRP  + 
Sbjct: 134 IIELLRNELGLEVLVAVPGHLD-DIKTDSKSSLDPGPDLVVRLARNNKMASSTRRPIVVT 192

Query: 312 HRLKVTRKSLYNWLQKRLGA 253
            RLKV RKSL+ WLQ+R+GA
Sbjct: 193 QRLKVRRKSLHEWLQRRVGA 212


>ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|222833355|gb|EEE71832.1|
            predicted protein [Populus trichocarpa]
          Length = 828

 Score =  184 bits (466), Expect = 3e-44
 Identities = 104/191 (54%), Positives = 131/191 (68%)
 Frame = -3

Query: 825  YNANDYYLKQLIEEWCEGILQGNNQNRVQPTSSSRTDLGGSQSLLLEKVAANLQKTGSES 646
            Y +NDYYLKQLIEEWCEG++Q NNQ +    S  RTDLG  +SLLLEKVAA+LQ   SE+
Sbjct: 649  YKSNDYYLKQLIEEWCEGVIQDNNQIQGGFASCKRTDLGRPRSLLLEKVAAHLQNNISEN 708

Query: 645  LAVDLRGLTKVEARIVVLAVLRMIKENYTPGNSLKDDMSIILGVQEVGSSDAKHDSVKDA 466
            LA+DL+GLTKVEARIVVLAVLRMIKENYT G S+K+DM I L V +V  +  +   VK+A
Sbjct: 709  LAIDLQGLTKVEARIVVLAVLRMIKENYTLGYSVKEDMWITLDVSKVDPASKRDSEVKNA 768

Query: 465  IVKLLQDDLGLEVIFAATASITLNSDADFKNTFAVGFPTQLESPTRRPADLHRLKVTRKS 286
            I++LL+++LGLEV+ A    +  +   D K++               P    RLKV RKS
Sbjct: 769  IIELLRNELGLEVLVAVPGHLD-DIKTDSKSSL-------------DPVVTQRLKVRRKS 814

Query: 285  LYNWLQKRLGA 253
            L+ WLQ+R GA
Sbjct: 815  LHEWLQRRAGA 825


>ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535493|gb|EEF37162.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 786

 Score =  175 bits (443), Expect = 1e-41
 Identities = 104/201 (51%), Positives = 130/201 (64%), Gaps = 10/201 (4%)
 Frame = -3

Query: 825  YNANDYYLKQLIEEWCEGILQGNNQNRVQPTSSSRTDLGGSQSLLLEKVAANLQKTGSES 646
            Y +ND YLKQLIEEWCEG++Q N+Q +       R + G   SLLLEKVAA+L    +ES
Sbjct: 585  YKSNDNYLKQLIEEWCEGVIQDNDQCQDDFKPCKRAEFGRPHSLLLEKVAAHLHHNVAES 644

Query: 645  LAVDLRGLTKVEARIVVLAVLRMIKENYTPGNSLKDDMSIILGVQEVGSSDAKHDS-VKD 469
            L+VDL+GLTKVEARIVVLAVLRM+KENY  G+ +KDDMSI LG+ +V    A   + VKD
Sbjct: 645  LSVDLQGLTKVEARIVVLAVLRMVKENYIQGHLVKDDMSITLGIDKVDVLPATQKAEVKD 704

Query: 468  AIVKLLQDDLGLEVIFA---------ATASITLNSDADFKNTFAVGFPTQLESPTRRPAD 316
            AI KLL ++LGLEV+               I LNS  ++    + G      S  RRP  
Sbjct: 705  AIFKLLHNELGLEVLIVVPRYTADLETDLEIPLNSYQNWSK--SSGRENIRVSSARRPLV 762

Query: 315  LHRLKVTRKSLYNWLQKRLGA 253
            L RLKVTR SL++WLQ++ GA
Sbjct: 763  LQRLKVTRNSLHSWLQRKAGA 783


>ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Glycine max]
          Length = 811

 Score =  174 bits (441), Expect = 2e-41
 Identities = 98/196 (50%), Positives = 138/196 (70%), Gaps = 8/196 (4%)
 Frame = -3

Query: 825  YNANDYYLKQLIEEWCEGILQGNNQNRVQPTSSSRTDLGGSQSLLLEKVAANLQKTGSES 646
            Y  NDYYL++LIEEWCEG++Q N + + + +SS++++    QSLLLEK+AA+L K  ++ 
Sbjct: 617  YKPNDYYLEELIEEWCEGVIQNNREKQGEFSSSNKSESERPQSLLLEKIAAHLLKRVADI 676

Query: 645  LAVDLRGLTKVEARIVVLAVLRMIKENYTPGNSLKDDMSIILGVQEVGSSDAKHD-SVKD 469
            LA+D++GLTKVEAR+VVLAVLRMIKENY  G+S+ DD+ II+G  +V  + +KH   V++
Sbjct: 677  LAIDVQGLTKVEARLVVLAVLRMIKENYGLGHSVNDDILIIIGATKVDENPSKHILEVQE 736

Query: 468  AIVKLLQDDLGLEVIFAATASITLNSDA-----DFKNTFAVGFPTQ--LESPTRRPADLH 310
            AI+KLL+++LGLEV F A   + L+  A     +F N      P +  L   TRRP  L 
Sbjct: 737  AIIKLLRNELGLEV-FPAKTRLALSDTANLEYPNFSNLSIEAQPGENALGFQTRRPGVLV 795

Query: 309  RLKVTRKSLYNWLQKR 262
            RLKVT+KSLY WL ++
Sbjct: 796  RLKVTKKSLYRWLHRK 811


Top