BLASTX nr result

ID: Angelica23_contig00027138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00027138
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282870.1| PREDICTED: RNA exonuclease 4-like [Vitis vin...   139   2e-31
emb|CBI20234.3| unnamed protein product [Vitis vinifera]              139   2e-31
emb|CAN66232.1| hypothetical protein VITISV_032253 [Vitis vinifera]   139   2e-31
ref|XP_002518369.1| RNA exonuclease, putative [Ricinus communis]...   138   5e-31
ref|NP_566499.1| exonuclease-like protein [Arabidopsis thaliana]...   137   1e-30

>ref|XP_002282870.1| PREDICTED: RNA exonuclease 4-like [Vitis vinifera]
          Length = 277

 Score =  139 bits (351), Expect = 2e-31
 Identities = 73/118 (61%), Positives = 86/118 (72%)
 Frame = +3

Query: 195 KLIAKGASSKPRDKSITPNDNSVLGKRKERSVEELDEPVAIDRNPLTPTSSDFSVTDTIA 374
           K+ A   S K  + +      ++LGKRKER   E   P A  RN L PT++D S+TD +A
Sbjct: 28  KIHASRPSQKSSNGAEPQTSKTILGKRKERPDAE---PDASQRNILIPTNTDSSLTDAVA 84

Query: 375 MDCEMVGVSPLGNKSALGRATLVNKWGNVIYDEFVRPVDYVVDFRTQISGIRPSDLKK 548
           MDCEMVGV   GNKSALGR TLVNKWGNVIYDE+VRPV++VVDFRT+ISGIRP DLKK
Sbjct: 85  MDCEMVGVGSEGNKSALGRVTLVNKWGNVIYDEYVRPVEWVVDFRTEISGIRPRDLKK 142


>emb|CBI20234.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  139 bits (351), Expect = 2e-31
 Identities = 73/118 (61%), Positives = 86/118 (72%)
 Frame = +3

Query: 195 KLIAKGASSKPRDKSITPNDNSVLGKRKERSVEELDEPVAIDRNPLTPTSSDFSVTDTIA 374
           K+ A   S K  + +      ++LGKRKER   E   P A  RN L PT++D S+TD +A
Sbjct: 46  KIHASRPSQKSSNGAEPQTSKTILGKRKERPDAE---PDASQRNILIPTNTDSSLTDAVA 102

Query: 375 MDCEMVGVSPLGNKSALGRATLVNKWGNVIYDEFVRPVDYVVDFRTQISGIRPSDLKK 548
           MDCEMVGV   GNKSALGR TLVNKWGNVIYDE+VRPV++VVDFRT+ISGIRP DLKK
Sbjct: 103 MDCEMVGVGSEGNKSALGRVTLVNKWGNVIYDEYVRPVEWVVDFRTEISGIRPRDLKK 160


>emb|CAN66232.1| hypothetical protein VITISV_032253 [Vitis vinifera]
          Length = 288

 Score =  139 bits (351), Expect = 2e-31
 Identities = 73/118 (61%), Positives = 86/118 (72%)
 Frame = +3

Query: 195 KLIAKGASSKPRDKSITPNDNSVLGKRKERSVEELDEPVAIDRNPLTPTSSDFSVTDTIA 374
           K+ A   S K  + +      ++LGKRKER   E   P A  RN L PT++D S+TD +A
Sbjct: 27  KIHASRPSQKSSNGAEPQTSKTILGKRKERPDAE---PDASQRNILIPTNTDSSLTDAVA 83

Query: 375 MDCEMVGVSPLGNKSALGRATLVNKWGNVIYDEFVRPVDYVVDFRTQISGIRPSDLKK 548
           MDCEMVGV   GNKSALGR TLVNKWGNVIYDE+VRPV++VVDFRT+ISGIRP DLKK
Sbjct: 84  MDCEMVGVGSEGNKSALGRVTLVNKWGNVIYDEYVRPVEWVVDFRTEISGIRPRDLKK 141


>ref|XP_002518369.1| RNA exonuclease, putative [Ricinus communis]
           gi|223542464|gb|EEF44005.1| RNA exonuclease, putative
           [Ricinus communis]
          Length = 299

 Score =  138 bits (348), Expect = 5e-31
 Identities = 70/110 (63%), Positives = 84/110 (76%)
 Frame = +3

Query: 219 SKPRDKSITPNDNSVLGKRKERSVEELDEPVAIDRNPLTPTSSDFSVTDTIAMDCEMVGV 398
           ++P + S +   NS+LGKRK+R     DE      NPLTPT+ DFS+TD IAMDCEMVG+
Sbjct: 60  ARPSNNSKSDTQNSILGKRKDRPGAASDE---CQPNPLTPTNDDFSLTDAIAMDCEMVGI 116

Query: 399 SPLGNKSALGRATLVNKWGNVIYDEFVRPVDYVVDFRTQISGIRPSDLKK 548
              GNKSALGR TLVN+WGNVIYDEFVRP++ VVDFRT+ISGIRP  L+K
Sbjct: 117 GQ-GNKSALGRVTLVNEWGNVIYDEFVRPIERVVDFRTKISGIRPQHLRK 165


>ref|NP_566499.1| exonuclease-like protein [Arabidopsis thaliana]
           gi|21593535|gb|AAM65502.1| exonuclease, putative
           [Arabidopsis thaliana] gi|90186238|gb|ABD91495.1|
           At3g15080 [Arabidopsis thaliana]
           gi|110737668|dbj|BAF00773.1| putative exonuclease
           [Arabidopsis thaliana] gi|195971099|gb|ACG60894.1|
           exonuclease domain-containing protein [Arabidopsis
           thaliana] gi|332642093|gb|AEE75614.1| exonuclease-like
           protein [Arabidopsis thaliana]
          Length = 275

 Score =  137 bits (344), Expect = 1e-30
 Identities = 71/107 (66%), Positives = 81/107 (75%)
 Frame = +3

Query: 228 RDKSITPNDNSVLGKRKERSVEELDEPVAIDRNPLTPTSSDFSVTDTIAMDCEMVGVSPL 407
           R  S   N +S+LGKRKER   E+D P     NPL P + D S+TD +AMDCEMVGVS  
Sbjct: 40  RKSSNPENPSSILGKRKERPDSEVDVPKI---NPLAPVNDDSSLTDEVAMDCEMVGVSQ- 95

Query: 408 GNKSALGRATLVNKWGNVIYDEFVRPVDYVVDFRTQISGIRPSDLKK 548
           G KSALGR TLVNKWGNV+YDEFVRPV++VVDFRT ISGIRP DL+K
Sbjct: 96  GTKSALGRVTLVNKWGNVLYDEFVRPVEHVVDFRTSISGIRPRDLRK 142


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