BLASTX nr result

ID: Angelica23_contig00027131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00027131
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326066.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [...   133   2e-29
ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putativ...   129   4e-28
ref|XP_001786160.1| predicted protein [Physcomitrella patens sub...   119   4e-25

>ref|XP_002326066.1| predicted protein [Populus trichocarpa] gi|222862941|gb|EEF00448.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  140 bits (354), Expect = 1e-31
 Identities = 73/127 (57%), Positives = 88/127 (69%)
 Frame = -3

Query: 552 VTGVAHVVNLDLPKTMEDYIHRIXXXXXXXXXXXXXSFYTERDMFLVAQIRKAISDVQSG 373
           VTGVAHV+NLDLPKTMEDY+HRI             SFYT+RD+FLVAQI+KAI+DV+SG
Sbjct: 406 VTGVAHVINLDLPKTMEDYVHRIGRTGRAGSTGQATSFYTDRDLFLVAQIKKAIADVESG 465

Query: 372 NTVAFATGXXXXXXXXXXXXXXXXXRTALSKQPSMGSMSVNVEDKYKYMIAPTIVKKEGS 193
           NTVAFATG                 R ALSK   MGS  +N+EDKY++MIAP+++  EG+
Sbjct: 466 NTVAFATGKAARRKEREAAASQKEARNALSK--VMGSTCINIEDKYRFMIAPSVITSEGA 523

Query: 192 ADDAWDD 172
           AD AWDD
Sbjct: 524 ADSAWDD 530


>ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [Vitis vinifera]
           gi|297745752|emb|CBI15808.3| unnamed protein product
           [Vitis vinifera]
          Length = 568

 Score =  133 bits (335), Expect = 2e-29
 Identities = 69/127 (54%), Positives = 85/127 (66%)
 Frame = -3

Query: 552 VTGVAHVVNLDLPKTMEDYIHRIXXXXXXXXXXXXXSFYTERDMFLVAQIRKAISDVQSG 373
           VTGVAHV+NLDLPK ME+Y+HRI             SFYT+RD+FLVA IRKAI+DV SG
Sbjct: 442 VTGVAHVINLDLPKAMENYVHRIGRTGRAGSTGQATSFYTDRDVFLVAHIRKAIADVGSG 501

Query: 372 NTVAFATGXXXXXXXXXXXXXXXXXRTALSKQPSMGSMSVNVEDKYKYMIAPTIVKKEGS 193
           NTVAFATG                 R ALS    MG  S+N+E+KY++M++P+ +K EG+
Sbjct: 502 NTVAFATGKVARKKEREAAAAQKEARIALSNLSLMGPTSLNIEEKYRFMMSPSSIKTEGA 561

Query: 192 ADDAWDD 172
           ADDAWDD
Sbjct: 562 ADDAWDD 568


>ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|222857806|gb|EEE95353.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score =  130 bits (327), Expect = 1e-28
 Identities = 71/133 (53%), Positives = 88/133 (66%), Gaps = 6/133 (4%)
 Frame = -3

Query: 552 VTGVAHVVNLDLPKTMEDYIHRIXXXXXXXXXXXXXSFYTERDMFLVAQIRKAISDVQSG 373
           VTGVAHV+NLDLPKTMEDY+HRI             SFYT++D+FLVAQI+KAI+DV+SG
Sbjct: 434 VTGVAHVINLDLPKTMEDYVHRIGRTGRAGSTGQATSFYTDQDLFLVAQIKKAIADVESG 493

Query: 372 NTVAFATGXXXXXXXXXXXXXXXXXRTALSKQ----PS--MGSMSVNVEDKYKYMIAPTI 211
           NTVAFATG                   AL K+    PS   G   +N+EDKY++M+AP+I
Sbjct: 494 NTVAFATG-------KTARRKEREAAAALHKEARNDPSKVTGPACINIEDKYRFMMAPSI 546

Query: 210 VKKEGSADDAWDD 172
           +K EG+AD AWDD
Sbjct: 547 IKSEGAADSAWDD 559


>ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223536802|gb|EEF38442.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 564

 Score =  129 bits (323), Expect = 4e-28
 Identities = 69/127 (54%), Positives = 83/127 (65%)
 Frame = -3

Query: 552 VTGVAHVVNLDLPKTMEDYIHRIXXXXXXXXXXXXXSFYTERDMFLVAQIRKAISDVQSG 373
           VTGV HV+NLDLPKTMEDY+HR+             SFYT+RD+FLVAQI+KAI+DV+SG
Sbjct: 440 VTGVTHVINLDLPKTMEDYVHRVGRTGRAGSAGQATSFYTDRDLFLVAQIKKAIADVKSG 499

Query: 372 NTVAFATGXXXXXXXXXXXXXXXXXRTALSKQPSMGSMSVNVEDKYKYMIAPTIVKKEGS 193
           NTVAFATG                 R  LSK   +G  S+N+EDKY++MIA +  K EG 
Sbjct: 500 NTVAFATGKVARRKEREAAASQKEARNDLSK--LLGPTSINIEDKYRFMIASSNTKGEGV 557

Query: 192 ADDAWDD 172
           AD AWDD
Sbjct: 558 ADSAWDD 564


>ref|XP_001786160.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162662029|gb|EDQ49028.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 377

 Score =  119 bits (297), Expect = 4e-25
 Identities = 65/129 (50%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
 Frame = -3

Query: 552 VTGVAHVVNLDLPKTMEDYIHRIXXXXXXXXXXXXXSFYTERDMFLVAQIRKAISDVQSG 373
           VTGVAHV+NLDLPKTMEDY+HRI             SFYTERD+FLVAQIR+AI++ +SG
Sbjct: 249 VTGVAHVINLDLPKTMEDYVHRIGRTGRAGASGRATSFYTERDVFLVAQIRRAITEAESG 308

Query: 372 NTVAFATGXXXXXXXXXXXXXXXXXRTALSKQPSMGSMSVNVEDKYKYMIAPTI--VKKE 199
           NT+AFATG                 R        +G+ +V V+DKYK+M++ T    K E
Sbjct: 309 NTMAFATGKAARRKEREQAAAFREGRMTPLGVAQVGATTVRVDDKYKHMLSATADPKKGE 368

Query: 198 GSADDAWDD 172
           G+ADDAW+D
Sbjct: 369 GAADDAWED 377


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