BLASTX nr result
ID: Angelica23_contig00027117
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00027117
(498 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containi... 156 1e-36
emb|CBI23556.3| unnamed protein product [Vitis vinifera] 155 4e-36
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi... 150 1e-34
ref|XP_002522011.1| pentatricopeptide repeat-containing protein,... 148 5e-34
ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containi... 143 1e-32
>ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 156 bits (395), Expect = 1e-36
Identities = 81/172 (47%), Positives = 114/172 (66%), Gaps = 7/172 (4%)
Frame = -3
Query: 496 NFKTPNFN---TNVIHLANTGQIHKAIHLFTT----HHHKLTPDLTTYSILLKSCIRTRN 338
+ K PNF +I + G++H H F+T PDLTTYSILLKSCIR RN
Sbjct: 34 SLKNPNFEPLKNRLIRQLDVGRLH---HAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRN 90
Query: 337 FDLGKLLHSKLISSGLVFDDDVIMLNSLITLYSKSGDLVTAKCIFDSMGDRRDLVSWCAI 158
F LGKL+H KL+ SGL D ++LN+LI+LYSK GD TA+ IF+ MG++RDLVSW A+
Sbjct: 91 FQLGKLVHRKLMQSGLELDS--VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAM 148
Query: 157 ISGFALNGMGRESVCVFVDMIKFGEYPNQFCFSGVLRACCSPENVDFGLVVF 2
+S FA N M +++ F+DM++ G YPN++CF+ V+RAC + + G +++
Sbjct: 149 VSCFANNSMELQAIWTFLDMLELGFYPNEYCFAAVIRACSNANHAWVGEIIY 200
Score = 70.9 bits (172), Expect = 1e-10
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Frame = -3
Query: 466 VIHLANTGQIHKAIHLFTTHHHK-LTPDLTTYSILLKSCIRTRNFDLGKLLHSKLISSGL 290
+ A G AI LF PD TYS +L +C LGK LHS++I GL
Sbjct: 252 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 311
Query: 289 VFDDDVIMLNSLITLYSK---SGDLVTAKCIFDSMGDRRDLVSWCAIISGFALNG-MGRE 122
DV + SL+ +Y+K G + ++ +F+ M + +++SW AII+ + +G +E
Sbjct: 312 AL--DVCVGCSLVDMYAKCAADGSVDDSRKVFERMPE-HNVMSWTAIITAYVQSGECDKE 368
Query: 121 SVCVFVDMIKFGEYPNQFCFSGVLRAC 41
++ +F MI +PN F FS VL+AC
Sbjct: 369 AIELFCKMISGHIWPNHFSFSSVLKAC 395
Score = 64.7 bits (156), Expect = 7e-09
Identities = 37/118 (31%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Frame = -3
Query: 391 PDLTTYSILLKSCIRTRNFDLGKLLHSKLISSGLVFDDDVIMLNSLITLYSK-SGDLVTA 215
P+ ++ ++++C + +G++++ ++ +G + + DV + LI ++ K SGDL +A
Sbjct: 175 PNEYCFAAVIRACSNANHAWVGEIIYGFVVKTGYL-EADVCVGCELIDMFVKGSGDLGSA 233
Query: 214 KCIFDSMGDRRDLVSWCAIISGFALNGMGRESVCVFVDMIKFGEYPNQFCFSGVLRAC 41
+FD M +R +LV+W +I+ FA G R+++ +F+DM G P++F +S VL AC
Sbjct: 234 YKVFDKMPER-NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 290
>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 155 bits (391), Expect = 4e-36
Identities = 81/172 (47%), Positives = 113/172 (65%), Gaps = 7/172 (4%)
Frame = -3
Query: 496 NFKTPNFN---TNVIHLANTGQIHKAIHLFTT----HHHKLTPDLTTYSILLKSCIRTRN 338
+ K PNF +I + G++H H F+T PDLTTYSILLKSCIR RN
Sbjct: 3 SLKNPNFEPLKNRLIRQLDVGRLH---HAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRN 59
Query: 337 FDLGKLLHSKLISSGLVFDDDVIMLNSLITLYSKSGDLVTAKCIFDSMGDRRDLVSWCAI 158
F LGKL+H KL+ SGL D ++LN+LI+LYSK GD TA+ IF+ MG++RDLVSW A+
Sbjct: 60 FQLGKLVHRKLMQSGLELDS--VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAM 117
Query: 157 ISGFALNGMGRESVCVFVDMIKFGEYPNQFCFSGVLRACCSPENVDFGLVVF 2
+S FA N M +++ F+DM++ G YPN++CF+ V+RAC + G +++
Sbjct: 118 VSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 169
Score = 69.7 bits (169), Expect = 2e-10
Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Frame = -3
Query: 466 VIHLANTGQIHKAIHLFTTHHHK-LTPDLTTYSILLKSCIRTRNFDLGKLLHSKLISSGL 290
+ A G AI LF PD TYS +L +C LGK LHS++I GL
Sbjct: 221 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 280
Query: 289 VFDDDVIMLNSLITLYSK---SGDLVTAKCIFDSMGDRRDLVSWCAIISGFALNG-MGRE 122
DV + SL+ +Y+K G + ++ +F+ M + +++SW AII+ + +G +E
Sbjct: 281 AL--DVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNVMSWTAIITAYVQSGECDKE 337
Query: 121 SVCVFVDMIKFGEYPNQFCFSGVLRAC 41
++ +F MI PN F FS VL+AC
Sbjct: 338 AIELFCKMISGHIRPNHFSFSSVLKAC 364
Score = 65.9 bits (159), Expect = 3e-09
Identities = 34/113 (30%), Positives = 65/113 (57%)
Frame = -3
Query: 379 TYSILLKSCIRTRNFDLGKLLHSKLISSGLVFDDDVIMLNSLITLYSKSGDLVTAKCIFD 200
T++ LL G+ +H +L+ G + + + N+LI++YS+ G++ A +F+
Sbjct: 457 TFASLLSGAASIGAMGKGEQIHGRLLKGG--YKSNQCICNALISMYSRCGNIEAAFQVFN 514
Query: 199 SMGDRRDLVSWCAIISGFALNGMGRESVCVFVDMIKFGEYPNQFCFSGVLRAC 41
M DR +++SW ++I+GFA +G ++ +F M++ G PN+ + VL AC
Sbjct: 515 EMEDR-NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC 566
Score = 63.5 bits (153), Expect = 2e-08
Identities = 37/118 (31%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Frame = -3
Query: 391 PDLTTYSILLKSCIRTRNFDLGKLLHSKLISSGLVFDDDVIMLNSLITLYSK-SGDLVTA 215
P+ ++ ++++C +G++++ ++ +G + + DV + LI ++ K SGDL +A
Sbjct: 144 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYL-EADVCVGCELIDMFVKGSGDLGSA 202
Query: 214 KCIFDSMGDRRDLVSWCAIISGFALNGMGRESVCVFVDMIKFGEYPNQFCFSGVLRAC 41
+FD M +R +LV+W +I+ FA G R+++ +F+DM G P++F +S VL AC
Sbjct: 203 YKVFDKMPER-NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 259
>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 150 bits (378), Expect = 1e-34
Identities = 76/154 (49%), Positives = 106/154 (68%), Gaps = 4/154 (2%)
Frame = -3
Query: 451 NTGQIHKAIHLFTT----HHHKLTPDLTTYSILLKSCIRTRNFDLGKLLHSKLISSGLVF 284
+ G++H H F+T PDLTTYSILLKSCIR RNF LGKL+H KL+ SGL
Sbjct: 3 DVGRLH---HAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLEL 59
Query: 283 DDDVIMLNSLITLYSKSGDLVTAKCIFDSMGDRRDLVSWCAIISGFALNGMGRESVCVFV 104
D ++LN+LI+LYSK GD TA+ IF+ MG++RDLVSW A++S FA N M +++ F+
Sbjct: 60 DS--VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFL 117
Query: 103 DMIKFGEYPNQFCFSGVLRACCSPENVDFGLVVF 2
DM++ G YPN++CF+ V+RAC + G +++
Sbjct: 118 DMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 151
Score = 69.7 bits (169), Expect = 2e-10
Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Frame = -3
Query: 466 VIHLANTGQIHKAIHLFTTHHHK-LTPDLTTYSILLKSCIRTRNFDLGKLLHSKLISSGL 290
+ A G AI LF PD TYS +L +C LGK LHS++I GL
Sbjct: 203 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 262
Query: 289 VFDDDVIMLNSLITLYSK---SGDLVTAKCIFDSMGDRRDLVSWCAIISGFALNG-MGRE 122
DV + SL+ +Y+K G + ++ +F+ M + +++SW AII+ + +G +E
Sbjct: 263 AL--DVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNVMSWTAIITAYVQSGECDKE 319
Query: 121 SVCVFVDMIKFGEYPNQFCFSGVLRAC 41
++ +F MI PN F FS VL+AC
Sbjct: 320 AIELFCKMISGHIRPNHFSFSSVLKAC 346
Score = 65.9 bits (159), Expect = 3e-09
Identities = 34/113 (30%), Positives = 65/113 (57%)
Frame = -3
Query: 379 TYSILLKSCIRTRNFDLGKLLHSKLISSGLVFDDDVIMLNSLITLYSKSGDLVTAKCIFD 200
T++ LL G+ +H +L+ G + + + N+LI++YS+ G++ A +F+
Sbjct: 439 TFASLLSGAASIGAMGKGEQIHGRLLKGG--YKSNQCICNALISMYSRCGNIEAAFQVFN 496
Query: 199 SMGDRRDLVSWCAIISGFALNGMGRESVCVFVDMIKFGEYPNQFCFSGVLRAC 41
M DR +++SW ++I+GFA +G ++ +F M++ G PN+ + VL AC
Sbjct: 497 EMEDR-NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC 548
Score = 63.5 bits (153), Expect = 2e-08
Identities = 37/118 (31%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Frame = -3
Query: 391 PDLTTYSILLKSCIRTRNFDLGKLLHSKLISSGLVFDDDVIMLNSLITLYSK-SGDLVTA 215
P+ ++ ++++C +G++++ ++ +G + + DV + LI ++ K SGDL +A
Sbjct: 126 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYL-EADVCVGCELIDMFVKGSGDLGSA 184
Query: 214 KCIFDSMGDRRDLVSWCAIISGFALNGMGRESVCVFVDMIKFGEYPNQFCFSGVLRAC 41
+FD M +R +LV+W +I+ FA G R+++ +F+DM G P++F +S VL AC
Sbjct: 185 YKVFDKMPER-NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 241
>ref|XP_002522011.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538815|gb|EEF40415.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 585
Score = 148 bits (373), Expect = 5e-34
Identities = 75/161 (46%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
Frame = -3
Query: 481 NFNTNVIHLANTGQIHKAI-HLFTTHHHKLTPDLTTYSILLKSCIRTRNFDLGKLLHSKL 305
+ NT +I+ G + KAI L + PDL TYS+LLKSCIR+ NF GKL+H+ L
Sbjct: 42 SLNTRLINHLKAGHLSKAIIALDVMTQNNTHPDLITYSLLLKSCIRSNNFQKGKLVHNCL 101
Query: 304 ISSGLVFDDDVIMLNSLITLYSKSGDLVTAKCIFDSMGDRRDLVSWCAIISGFALNGMGR 125
SGL D ++LNSLI+LYSK G+L +A IF SMG++RDLVSW A+IS +A NG+
Sbjct: 102 TQSGLELDS--VILNSLISLYSKCGELNSANDIFISMGNKRDLVSWSALISCYATNGLEF 159
Query: 124 ESVCVFVDMIKFGEYPNQFCFSGVLRACCSPENVDFGLVVF 2
+++ V++DM+ G +PN++C+S V+++C + EN +G ++F
Sbjct: 160 DAIRVYIDMLVSGFFPNEYCYSAVIKSCSNRENFSYGEIIF 200
Score = 74.7 bits (182), Expect = 7e-12
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Frame = -3
Query: 391 PDLTTYSILLKSCIRTRNFDLGKLLHSKLISSGLVFDDDVIMLNSLITLYSK---SGDLV 221
PD T S ++ +C LGK LHS I SGLV+ DV + SL+ +Y+K G L
Sbjct: 278 PDNYTLSGVVSACAELGLLSLGKELHSWAIKSGLVY--DVCVGCSLVDMYAKCAVDGSLD 335
Query: 220 TAKCIFDSMGDRRDLVSWCAIISGFALNGMG-RESVCVFVDMIKFGEYPNQFCFSGVLRA 44
++ +FD M +++SW AII+G+ NG E+ +F++MI+ PN F FS +L+A
Sbjct: 336 DSRKVFDRM-TNHNVMSWTAIITGYVQNGRSDMEATELFLEMIEGHVKPNHFTFSSILKA 394
Query: 43 CCSPENVDFG 14
C + ++ G
Sbjct: 395 CANLSDLHLG 404
Score = 67.4 bits (163), Expect = 1e-09
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = -3
Query: 391 PDLTTYSILLKSCIRTRNFDLGKLLHSKLISSGLVFDDDVIMLNSLITLYSKS-GDLVTA 215
P+ YS ++KSC NF G+++ LI G + + V + +LI +Y+K GD+ A
Sbjct: 175 PNEYCYSAVIKSCSNRENFSYGEIIFGSLIKCGYL-NSHVCVGCALIDMYAKGCGDVEGA 233
Query: 214 KCIFDSMGDRRDLVSWCAIISGFALNGMGRESVCVFVDMIKFGEYPNQFCFSGVLRAC 41
+FD+M +R ++V+W +IS F G R+++ +F MI G P+ + SGV+ AC
Sbjct: 234 CKVFDNMSER-NIVTWTLMISRFQQLGYYRDAIDLFNHMIFSGFMPDNYTLSGVVSAC 290
>ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 143 bits (361), Expect = 1e-32
Identities = 80/166 (48%), Positives = 102/166 (61%), Gaps = 2/166 (1%)
Frame = -3
Query: 493 FKTPNFNTN-VIHLANTGQIHKAIHLFTTHHHKLT-PDLTTYSILLKSCIRTRNFDLGKL 320
F PN T +I N G++HKAI H+ + PDL TYS+ LK CIRTR+FD+G L
Sbjct: 28 FTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTL 87
Query: 319 LHSKLISSGLVFDDDVIMLNSLITLYSKSGDLVTAKCIFDSMGDRRDLVSWCAIISGFAL 140
+H KL S L D + LNSLI+LYSK G A IF MG RDL+SW A++S FA
Sbjct: 88 VHEKLTQSDLQLDS--VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFAN 145
Query: 139 NGMGRESVCVFVDMIKFGEYPNQFCFSGVLRACCSPENVDFGLVVF 2
N MG ++ FVDMI+ G YPN++CF+ RAC + E V G +F
Sbjct: 146 NNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIF 191
Score = 72.0 bits (175), Expect = 5e-11
Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
Frame = -3
Query: 481 NFNTNVIHLANTGQIHKAIHLFTTHHHK-LTPDLTTYSILLKSCIRTRNFDLGKLLHSKL 305
++NT + A +A+ LF + + T++ LL G+ +H+++
Sbjct: 444 SYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARV 503
Query: 304 ISSGLVFDDDVIMLNSLITLYSKSGDLVTAKCIFDSMGDRRDLVSWCAIISGFALNGMGR 125
I SGL + V N+LI++YS+ G++ +A +F+ M DR +++SW +II+GFA +G
Sbjct: 504 IKSGLKLNQSVC--NALISMYSRCGNIESAFQVFEDMEDR-NVISWTSIITGFAKHGFAT 560
Query: 124 ESVCVFVDMIKFGEYPNQFCFSGVLRAC 41
+++ +F M++ G PN + VL AC
Sbjct: 561 QALELFHKMLEEGVRPNLVTYIAVLSAC 588
Score = 62.0 bits (149), Expect = 5e-08
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Frame = -3
Query: 391 PDLTTYSILLKSCIRTRNFDLGKLLHSKLISSGLVFDDDVIMLNSLITLYSK---SGDLV 221
PD T S ++ +C LG+ LHS+ I GL D V LI +Y+K G +
Sbjct: 269 PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCC--LINMYAKCSVDGSMC 326
Query: 220 TAKCIFDSMGDRRDLVSWCAIISGFALNG-MGRESVCVFVDMIKFGEYPNQFCFSGVLRA 44
A+ IFD + D ++ SW A+I+G+ G E++ +F MI PN F FS L+A
Sbjct: 327 AARKIFDQILDH-NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKA 385
Query: 43 CCSPENVDFGLVVF 2
C + + G VF
Sbjct: 386 CANLAALRIGEQVF 399