BLASTX nr result

ID: Angelica23_contig00027115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00027115
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SQL2.1|CB24_PEA RecName: Full=Chlorophyll a-b binding prote...   165   3e-39
pdb|2WSC|4 Chain 4, Improved Model Of Plant Photosystem I gi|268...   165   3e-39
gb|ACJ85068.1| unknown [Medicago truncatula] gi|388507876|gb|AFK...   165   3e-39
gb|ACB05669.1| chloroplast chlorophyll a/b binding protein [Caps...   164   5e-39
emb|CAK24966.1| chlorophyll a/b binding protein [Solanum tuberosum]   164   7e-39

>sp|Q9SQL2.1|CB24_PEA RecName: Full=Chlorophyll a-b binding protein P4, chloroplastic;
           AltName: Full=LHCI type III CAB-P4; Flags: Precursor
           gi|6470348|gb|AAF13731.1| PSI light-harvesting antenna
           chlorophyll a/b-binding protein [Pisum sativum]
          Length = 252

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/80 (96%), Positives = 78/80 (97%)
 Frame = +2

Query: 2   FKVEAKKGEWLPGLASPGYLDGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGV 181
           FKVEAKKGEWLPGLASPGYL GSLPGDNGFDPLGLAEDPENL+WFVQAELVNGRWAMLGV
Sbjct: 47  FKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGV 106

Query: 182 AGMLLPEVLTSIGIINVPKW 241
           AGMLLPEV TSIGIINVPKW
Sbjct: 107 AGMLLPEVFTSIGIINVPKW 126


>pdb|2WSC|4 Chain 4, Improved Model Of Plant Photosystem I
           gi|268612179|pdb|2WSE|4 Chain 4, Improved Model Of Plant
           Photosystem I gi|268612197|pdb|2WSF|4 Chain 4, Improved
           Model Of Plant Photosystem I
          Length = 251

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/80 (96%), Positives = 78/80 (97%)
 Frame = +2

Query: 2   FKVEAKKGEWLPGLASPGYLDGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGV 181
           FKVEAKKGEWLPGLASPGYL GSLPGDNGFDPLGLAEDPENL+WFVQAELVNGRWAMLGV
Sbjct: 47  FKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGV 106

Query: 182 AGMLLPEVLTSIGIINVPKW 241
           AGMLLPEV TSIGIINVPKW
Sbjct: 107 AGMLLPEVFTSIGIINVPKW 126


>gb|ACJ85068.1| unknown [Medicago truncatula] gi|388507876|gb|AFK42004.1| unknown
           [Medicago truncatula]
          Length = 253

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/80 (96%), Positives = 78/80 (97%)
 Frame = +2

Query: 2   FKVEAKKGEWLPGLASPGYLDGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGV 181
           FKVEAKKGEWLPGLASPGYL GSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGV
Sbjct: 47  FKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGV 106

Query: 182 AGMLLPEVLTSIGIINVPKW 241
           AGMLLPEV T+IGIINVPKW
Sbjct: 107 AGMLLPEVFTNIGIINVPKW 126


>gb|ACB05669.1| chloroplast chlorophyll a/b binding protein [Capsicum annuum]
          Length = 250

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/80 (93%), Positives = 78/80 (97%)
 Frame = +2

Query: 2   FKVEAKKGEWLPGLASPGYLDGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGV 181
           FKVEAKKGEWLPGLASP YLDGSLPGDNGFDPLGLAEDPENLKW++QAELVNGRWAMLGV
Sbjct: 45  FKVEAKKGEWLPGLASPAYLDGSLPGDNGFDPLGLAEDPENLKWYIQAELVNGRWAMLGV 104

Query: 182 AGMLLPEVLTSIGIINVPKW 241
           AGMLLPEV TSIGI+NVPKW
Sbjct: 105 AGMLLPEVFTSIGILNVPKW 124


>emb|CAK24966.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 251

 Score =  164 bits (415), Expect = 7e-39
 Identities = 75/80 (93%), Positives = 78/80 (97%)
 Frame = +2

Query: 2   FKVEAKKGEWLPGLASPGYLDGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGV 181
           FKVEAKKG+WLPGLASP YLDGSLPGDNGFDPLGLAEDPENLKWF+QAELVNGRWAMLGV
Sbjct: 47  FKVEAKKGQWLPGLASPDYLDGSLPGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGV 106

Query: 182 AGMLLPEVLTSIGIINVPKW 241
           AGMLLPEV TSIGI+NVPKW
Sbjct: 107 AGMLLPEVFTSIGILNVPKW 126


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