BLASTX nr result
ID: Angelica23_contig00027076
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00027076
(648 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas... 115 2e-41
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 100 2e-38
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas... 105 3e-38
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera] 100 1e-37
gb|ABN08570.1| WW/Rsp5/WWP [Medicago truncatula] 92 1e-36
>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 573
Score = 115 bits (287), Expect(2) = 2e-41
Identities = 53/104 (50%), Positives = 71/104 (68%)
Frame = +2
Query: 122 YLGLPCTMGRNKSAILGYLKDRMRTRIQSWDNKWFSRGSKEVLLKTMVQSVPTYAMNVFL 301
YLGLP +GRNK+AI YLKDR+ + QSW + SR KEVL+K++ Q++P+Y M FL
Sbjct: 281 YLGLPSMVGRNKNAIFSYLKDRIWKKCQSWSVRSLSRADKEVLIKSVAQAIPSYCMGAFL 340
Query: 302 LPVGLCNELERMMARFWWTSRSSQDKGIISKSWKRMTVHKSEGG 433
+P LC ELERMM F+W S+ + +GI W +T+HKS GG
Sbjct: 341 IPASLCEELERMMNSFYWGSKKNGRRGINWMRWDFLTLHKSLGG 384
Score = 80.1 bits (196), Expect(2) = 2e-41
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +1
Query: 430 GMSFRSMHEFNVAMLGK*GWRLLTRPDLLVSKVFKGRYYPRGDFLSAGLGSNPSFVWRSV 609
G+ FR++ FN++MLGK GW+LL+ L +++ K +Y+PR DFL A LG NPS+ WRS+
Sbjct: 384 GLGFRNLEAFNLSMLGKQGWKLLSDSSSLFTRILKAKYFPRRDFLDATLGHNPSYTWRSL 443
Query: 610 REAQSLLRNGLR 645
QSLL G R
Sbjct: 444 WSTQSLLTLGHR 455
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 100 bits (249), Expect(2) = 2e-38
Identities = 46/116 (39%), Positives = 73/116 (62%)
Frame = +2
Query: 86 VLRIPEASDISTYLGLPCTMGRNKSAILGYLKDRMRTRIQSWDNKWFSRGSKEVLLKTMV 265
+L++ E +D YLG+P +G+NK + +++ ++ RIQ+W+ + SR KE+ LKT+
Sbjct: 206 ILQVEEXADPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVA 265
Query: 266 QSVPTYAMNVFLLPVGLCNELERMMARFWWTSRSSQDKGIISKSWKRMTVHKSEGG 433
QS+PTY M + LLP LC ++E MM F+W S + Q + I SW +M K +GG
Sbjct: 266 QSIPTYVMQLLLLPKDLCRDIESMMNGFFWDS-NPQCRSIRWMSWGKMCKQKKDGG 320
Score = 85.1 bits (209), Expect(2) = 2e-38
Identities = 36/70 (51%), Positives = 51/70 (72%)
Frame = +1
Query: 430 GMSFRSMHEFNVAMLGK*GWRLLTRPDLLVSKVFKGRYYPRGDFLSAGLGSNPSFVWRSV 609
G+ FR + +FN+A+L K GWR L PD LV+++F+ RY+ FL+A LGSNPS++WRS+
Sbjct: 320 GLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSI 379
Query: 610 REAQSLLRNG 639
AQ LL+ G
Sbjct: 380 LAAQGLLKRG 389
>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 653
Score = 105 bits (262), Expect(2) = 3e-38
Identities = 48/116 (41%), Positives = 75/116 (64%)
Frame = +2
Query: 86 VLRIPEASDISTYLGLPCTMGRNKSAILGYLKDRMRTRIQSWDNKWFSRGSKEVLLKTMV 265
+L + E I YLGLP +GR+K +I Y+KDR+ RI +K S+ KEVL+K++
Sbjct: 330 MLWVSEGIGIRKYLGLPSMIGRSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVA 389
Query: 266 QSVPTYAMNVFLLPVGLCNELERMMARFWWTSRSSQDKGIISKSWKRMTVHKSEGG 433
Q++P+Y M+VFLLP + +++E+M+ FWW ++ GI SW+R+T+ K GG
Sbjct: 390 QAIPSYCMSVFLLPHSIADDIEKMLNSFWWGMKNEGRGGIRWMSWERLTMRKEWGG 445
Score = 79.3 bits (194), Expect(2) = 3e-38
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +1
Query: 430 GMSFRSMHEFNVAMLGK*GWRLLTRPDLLVSKVFKGRYYPRGDFLSAGLGSNPSFVWRSV 609
GM FR +H F++AM GK W LT PD +VS++FK +Y+ +FL A LG NPS+VWRS+
Sbjct: 445 GMGFRHIHGFDLAMSGKQCWNFLTNPDAMVSRIFKAKYFTNENFLGASLGHNPSYVWRSI 504
Query: 610 REAQSLLRNG 639
++ L+ G
Sbjct: 505 WSSRIFLKTG 514
>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
Length = 517
Score = 100 bits (250), Expect(2) = 1e-37
Identities = 43/116 (37%), Positives = 72/116 (62%)
Frame = +2
Query: 86 VLRIPEASDISTYLGLPCTMGRNKSAILGYLKDRMRTRIQSWDNKWFSRGSKEVLLKTMV 265
+L + + YLGL +G++K + G+L+DR+ R+Q W +K S+ K++L+K +
Sbjct: 139 ILGVSTPLNTGRYLGLLSLIGKSKRVVFGFLRDRLWRRLQGWQSKLLSQAGKKILIKVVG 198
Query: 266 QSVPTYAMNVFLLPVGLCNELERMMARFWWTSRSSQDKGIISKSWKRMTVHKSEGG 433
Q++P+Y M+ FLLP+ L EL++MM FWW +S + I SW ++ + K EGG
Sbjct: 199 QAIPSYCMSTFLLPISLSEELQKMMNSFWWGPKSDGGRRINWLSWDKLCLRKEEGG 254
Score = 82.0 bits (201), Expect(2) = 1e-37
Identities = 34/67 (50%), Positives = 50/67 (74%)
Frame = +1
Query: 430 GMSFRSMHEFNVAMLGK*GWRLLTRPDLLVSKVFKGRYYPRGDFLSAGLGSNPSFVWRSV 609
G+ FR++ +FN+AMLGK GW L+T+PD L++++ K RYY DFLSA L NPSF W+ +
Sbjct: 254 GLGFRNLRDFNLAMLGKQGWNLITKPDSLIARLLKARYYCSRDFLSARLSHNPSFTWKGI 313
Query: 610 REAQSLL 630
+Q++L
Sbjct: 314 WSSQAIL 320
>gb|ABN08570.1| WW/Rsp5/WWP [Medicago truncatula]
Length = 265
Score = 91.7 bits (226), Expect(2) = 1e-36
Identities = 38/94 (40%), Positives = 66/94 (70%)
Frame = +2
Query: 122 YLGLPCTMGRNKSAILGYLKDRMRTRIQSWDNKWFSRGSKEVLLKTMVQSVPTYAMNVFL 301
YLG+ +GR+KS+ ++KDRM ++I SW ++ S+ +E+L+K+++QS+P+Y M+ F+
Sbjct: 12 YLGVLSMVGRSKSSTFKFIKDRMWSKINSWSSRCLSQAGREILIKSVLQSIPSYLMSTFM 71
Query: 302 LPVGLCNELERMMARFWWTSRSSQDKGIISKSWK 403
LP L NE+E+M+ FWW + ++G+ KS K
Sbjct: 72 LPNSLINEIEKMLNAFWWGHGNGSNRGMCFKSLK 105
Score = 87.8 bits (216), Expect(2) = 1e-36
Identities = 36/73 (49%), Positives = 54/73 (73%)
Frame = +1
Query: 427 RGMSFRSMHEFNVAMLGK*GWRLLTRPDLLVSKVFKGRYYPRGDFLSAGLGSNPSFVWRS 606
RGM F+S+ FN+AMLGK W++LT P +++++FK RY+P D+ +A G NPS+VWRS
Sbjct: 97 RGMCFKSLKAFNMAMLGKQAWKILTHPKSMITRLFKARYFPTSDYFAARSGHNPSYVWRS 156
Query: 607 VREAQSLLRNGLR 645
+ +S+L+NG R
Sbjct: 157 IWSVKSVLQNGFR 169