BLASTX nr result

ID: Angelica23_contig00027020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00027020
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC66627.1| F-box [Prunus mume]                                    60   5e-07
ref|XP_003614798.1| F-box protein [Medicago truncatula] gi|35551...    59   2e-06
dbj|BAC66626.1| F-box [Prunus mume]                                    59   2e-06
ref|XP_003615546.1| F-box/kelch-repeat protein [Medicago truncat...    58   3e-06
dbj|BAF36714.1| S locus F-box protein with the low allelic seque...    57   4e-06

>dbj|BAC66627.1| F-box [Prunus mume]
          Length = 428

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 76/313 (24%), Positives = 136/313 (43%), Gaps = 54/313 (17%)
 Frame = -1

Query: 793  GIVCVSVDLSDWPVTKKKFDIYLWNPATKHSKLIPP---------------------YTK 677
            G++C++   S+        DI L NPA +  +++P                      Y +
Sbjct: 140  GLICLNTFNSE--------DIVLCNPALEEYRVLPKSCILLPPRVPRQFEENEDDDYYEE 191

Query: 676  PNDDRTSG---ALGFGFDHIDFDFKLVKV--------LSHNLSAKVYSSIRTDWQNIQPK 530
             +DD        +GFG+D    D+K+V+           H    +VYS     W+ +   
Sbjct: 192  DDDDEIESNPKCVGFGYDPNSKDYKVVRAAQFVSGVFTQHPSKVEVYSLAADTWREV--- 248

Query: 529  PSDV-PQGN---SFDVCFHGFLFAIG----KNSGMMAFDLNKELFICDINLPVSSFDDAP 374
            P D+ P G+   S+ + F GF + I     + + +++FD+++E+F  DI LP    +  P
Sbjct: 249  PVDIQPHGSLNPSYQMYFKGFFYWIAYWTEERNVILSFDMSEEVF-HDIALP----ESGP 303

Query: 373  GSIE-TRVSDFKDTITVI---FSNMFNGKIQLWTLGDEACLRVGGVRALWTIVLSI---- 218
             + E T ++ +KD++ ++     N     + LW L ++    + G + LWT  L+I    
Sbjct: 304  DAYEYTSIAVWKDSLALLTYPVENEAPKTLDLWVLDED----LKGAKGLWTKHLAIGPLE 359

Query: 217  -DVGVPLHFVEGLFNNFQFLLVNRDGDRFMYDLNKKVTTDVTGPYFETGEIFN-----YT 56
              V  PL F    + + + L+V  +GD   Y L+ +    V  P    GE  N     Y 
Sbjct: 360  KGVEAPLVF----WKDKELLMVTTNGDVVNYSLDTQKLKHV--PRHGLGEPTNIQAVPYV 413

Query: 55   KSLFSLEGFKRIK 17
             S+ S++   +I+
Sbjct: 414  NSIVSIKPGNKIE 426


>ref|XP_003614798.1| F-box protein [Medicago truncatula] gi|355516133|gb|AES97756.1|
           F-box protein [Medicago truncatula]
          Length = 427

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 61/246 (24%), Positives = 99/246 (40%), Gaps = 34/246 (13%)
 Frame = -1

Query: 727 LWNPATKHSKLIPPY---TKPNDDRTSGALGFGFDHIDFDFKLV--KVLSHNLSA----- 578
           LWNP+TK SKLIPP    ++PN        GFG+D +  D+K++    +S N        
Sbjct: 169 LWNPSTKESKLIPPSPFDSEPNWRFCVIHRGFGYDSVRDDYKVICYGKVSRNCYGVFTEE 228

Query: 577 --------KVYSSIRTDWQNIQPKPSDVPQGNSFDVCFHGFLFAIG-----------KNS 455
                   ++YS  R  W+ +     DV   N  D C H  L+  G           +  
Sbjct: 229 ANCGSYLWEIYSVRRNCWRKL-----DVDMHNKHDSCNHQQLYVDGLSHWMCFGETCQER 283

Query: 454 GMMAFDLNKELFICDINLPVSSFDDAPGSIE-----TRVSDFKDTITVIFSNMFNGKIQL 290
            M++FD + E+F+  + +P +   +  G +E      ++     +I  I S    G   +
Sbjct: 284 YMLSFDWSNEIFLTTL-IPPAPISNINGRLEDFWGMKQLFLLNGSIAFIVSYKETGTFHI 342

Query: 289 WTLGDEACLRVGGVRALWTIVLSIDVGVPLHFVEGLFNNFQFLLVNRDGDRFMYDLNKKV 110
             LG+       GV+  WT +  +     L +  G       L   +DG    +DLN + 
Sbjct: 343 SILGEL------GVKESWTKIFIVGPFPCLEYPIGAGKKGDMLFRKKDGKFAWFDLNTQT 396

Query: 109 TTDVTG 92
             +  G
Sbjct: 397 IIEEFG 402


>dbj|BAC66626.1| F-box [Prunus mume]
          Length = 428

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 75/313 (23%), Positives = 135/313 (43%), Gaps = 54/313 (17%)
 Frame = -1

Query: 793  GIVCVSVDLSDWPVTKKKFDIYLWNPATKHSKLIPP---------------------YTK 677
            G++C++   S+        DI L NPA +  +++P                      Y +
Sbjct: 140  GLICLNTFNSE--------DIVLCNPALEEYRVLPKSCILLPPRVPRQFEENEDDDYYEE 191

Query: 676  PNDDRTSG---ALGFGFDHIDFDFKLVKV--------LSHNLSAKVYSSIRTDWQNIQPK 530
             +DD        +GFG+D    D+K+V+           H    +VYS     W+ +   
Sbjct: 192  DDDDEIESNPKCVGFGYDPNSKDYKVVRAAQFVSGVFTQHPSKVEVYSLAADTWREV--- 248

Query: 529  PSDV-PQGN---SFDVCFHGFLFAIG----KNSGMMAFDLNKELFICDINLPVSSFDDAP 374
            P D+ P G+   S+ + F GF + I     + + +++FD+++E+F  DI LP    +  P
Sbjct: 249  PVDIQPHGSLNPSYQMYFKGFFYWIAYWTEERNVILSFDMSEEVF-HDIALP----ESGP 303

Query: 373  GSIE-TRVSDFKDTITVI---FSNMFNGKIQLWTLGDEACLRVGGVRALWTIVLSI---- 218
             + E T ++ +KD++ ++     N     + LW   ++    + G + LWT  L+I    
Sbjct: 304  DAYEYTSIAVWKDSLVLLTYPVENEAPKTLDLWVFDED----LKGAKGLWTKHLAIGPLE 359

Query: 217  -DVGVPLHFVEGLFNNFQFLLVNRDGDRFMYDLNKKVTTDVTGPYFETGEIFN-----YT 56
              V  PL F    + + + L+V  +GD   Y L+ +    V  P    GE  N     Y 
Sbjct: 360  KGVEAPLVF----WKDEELLMVTTNGDVVNYSLDTQKLKHV--PRHGLGEPTNIQAVPYV 413

Query: 55   KSLFSLEGFKRIK 17
             S+ S++   +I+
Sbjct: 414  NSIVSIKPGNKIE 426


>ref|XP_003615546.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516881|gb|AES98504.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 465

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 66/244 (27%), Positives = 98/244 (40%), Gaps = 35/244 (14%)
 Frame = -1

Query: 727 LWNPATKHSKLIPPYTKPNDDRTSGAL-----GFGFDHIDFDFKLV---KVLSHNLSAKV 572
           LWNP+TK SKLIPP   P D   +  L     GFG+D I  D+K++   KV   N   +V
Sbjct: 163 LWNPSTKESKLIPP--SPFDSGPNWYLFVDHRGFGYDSIRDDYKVICHGKVSKRNYYGEV 220

Query: 571 -----------YSSIRTDWQNIQPKPSDVPQGNSFDVCFHGFLFAIGKNSG--------- 452
                      YS  R  W+ +     DV   N    C    L+  G +           
Sbjct: 221 NKEVDSYLWEIYSVRRNCWRKL-----DVGVHNKHKSCEREQLYIDGLSHWMCYGETRYY 275

Query: 451 ---MMAFDLNKELFICDINLPVSS----FDDAPGSIETRVSDFKDTITVIFSNMFNGKIQ 293
              M++FD + E+F+     PVS+    F+   G I+  +     +I  I S +  G   
Sbjct: 276 ERYMLSFDWSNEIFLTTPIPPVSNINGCFEYFLGMIQLVL--LNGSIAFIISYIETGTFH 333

Query: 292 LWTLGDEACLRVGGVRALWTIVLSIDVGVPLHFVEGLFNNFQFLLVNRDGDRFMYDLNKK 113
           +  LG+       GV+  WT +  +     L    G       L + +DG+    DLN +
Sbjct: 334 ISILGEL------GVKESWTKIFIVGPFPCLECPIGAGKKGDMLFIKKDGELAWIDLNTQ 387

Query: 112 VTTD 101
           +  D
Sbjct: 388 IIED 391


>dbj|BAF36714.1| S locus F-box protein with the low allelic sequence polymorphism
           2-S4 [Prunus avium]
          Length = 424

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 77/313 (24%), Positives = 134/313 (42%), Gaps = 54/313 (17%)
 Frame = -1

Query: 793 GIVCVSVDLSDWPVTKKKFDIYLWNPATKHSKLIPP---------------------YTK 677
           G++C++   S+        DI L NPA +  +++P                      Y +
Sbjct: 136 GLICLNTFNSE--------DIVLCNPALEEYRVLPKSCILLPPRVPRQVEENEDDDYYEE 187

Query: 676 PNDDRTSG---ALGFGFDHIDFDFKLVKV--------LSHNLSAKVYSSIRTDWQNIQPK 530
            +DD        +GFG+D    D+K+V+           H    +VYS     W+ I   
Sbjct: 188 DDDDEIESNPKCVGFGYDPNSKDYKVVRAAQFVSGVFTQHPSKVEVYSLAADTWREI--- 244

Query: 529 PSDV-PQGN---SFDVCFHGFLFAIG----KNSGMMAFDLNKELFICDINLPVSSFDDAP 374
           P D+ P G+   S+ + F GF + I     + + +++FD+++E+F   I LP    +  P
Sbjct: 245 PVDIQPHGSLNPSYQMYFKGFFYWIAYWTEERNVILSFDMSEEVF-HGIALP----ESGP 299

Query: 373 GSIE-TRVSDFKDTITVI---FSNMFNGKIQLWTLGDEACLRVGGVRALWTIVLSI---- 218
            + E T ++ +KD++ ++     N     I LW L ++    + G + LWT  L+I    
Sbjct: 300 DAYEYTSIAVWKDSLVLLTYPVENEAPKTIDLWVLDED----LKGAKGLWTKHLAIGPLE 355

Query: 217 -DVGVPLHFVEGLFNNFQFLLVNRDGDRFMYDLNKKVTTDVTGPYFETGEIFN-----YT 56
             V  PL F    + + + L+V  +GD   Y L+      V  P    GE  N     Y 
Sbjct: 356 KGVEAPLVF----WKDEELLMVTTNGDVVNYSLDTLKLKHV--PRHGLGEPTNIQAVPYV 409

Query: 55  KSLFSLEGFKRIK 17
            S+ S++   +I+
Sbjct: 410 NSIVSIKPGNKIE 422


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