BLASTX nr result

ID: Angelica23_contig00026998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026998
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050802.1| Os03g0655200 [Oryza sativa Japonica Group] g...    69   7e-10
ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|29...    68   9e-10
ref|NP_181227.1| golgi SNAP receptor complex member 2 [Arabidops...    68   1e-09
ref|NP_199855.1| membrin 12 [Arabidopsis thaliana] gi|27805575|s...    68   1e-09
ref|XP_002881481.1| MEMB11 [Arabidopsis lyrata subsp. lyrata] gi...    68   1e-09

>ref|NP_001050802.1| Os03g0655200 [Oryza sativa Japonica Group]
           gi|50582751|gb|AAT78821.1| putative vesicle transport
           protein [Oryza sativa Japonica Group]
           gi|108710166|gb|ABF97961.1| Vesicle transport v-SNARE
           protein, expressed [Oryza sativa Japonica Group]
           gi|113549273|dbj|BAF12716.1| Os03g0655200 [Oryza sativa
           Japonica Group] gi|218193422|gb|EEC75849.1| hypothetical
           protein OsI_12850 [Oryza sativa Indica Group]
           gi|222625485|gb|EEE59617.1| hypothetical protein
           OsJ_11948 [Oryza sativa Japonica Group]
          Length = 244

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = +3

Query: 3   GLSNSVLRLIERRNRVDQWIKYAGMALTIIVLIAFWRWT 119
           GLSNSVL+LIERR+RVD+WI YAGM +T++V+  FWRWT
Sbjct: 205 GLSNSVLKLIERRHRVDKWIAYAGMMITVVVMFVFWRWT 243


>ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|296085896|emb|CBI31220.3|
           unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = +3

Query: 3   GLSNSVLRLIERRNRVDQWIKYAGMALTIIVLIAFWRW 116
           GLSNSVL+LIERRNRVD+WIKY GM ++++VL  FWRW
Sbjct: 185 GLSNSVLKLIERRNRVDKWIKYTGMVVSVVVLYTFWRW 222


>ref|NP_181227.1| golgi SNAP receptor complex member 2 [Arabidopsis thaliana]
           gi|11132470|sp|Q9SJL6.1|MEM11_ARATH RecName:
           Full=Membrin-11; Short=AtMEMB11; AltName: Full=27 kDa
           Golgi SNARE protein; AltName: Full=Golgi SNAP receptor
           complex member 2-1 gi|4883606|gb|AAD31575.1| putative
           cis-Golgi SNARE protein [Arabidopsis thaliana]
           gi|17380684|gb|AAL36172.1| putative cis-Golgi SNARE
           protein [Arabidopsis thaliana]
           gi|20259147|gb|AAM14289.1| putative cis-Golgi SNARE
           protein [Arabidopsis thaliana]
           gi|21592458|gb|AAM64409.1| putative cis-Golgi SNARE
           protein [Arabidopsis thaliana]
           gi|330254224|gb|AEC09318.1| golgi SNAP receptor complex
           member 2 [Arabidopsis thaliana]
          Length = 225

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   GLSNSVLRLIERRNRVDQWIKYAGMALTIIVLIAFWRWTR 122
           GLSNSVLRLIERRNRVD WIKYAGM  T+++L  F RWTR
Sbjct: 186 GLSNSVLRLIERRNRVDTWIKYAGMIATLVILYLFIRWTR 225


>ref|NP_199855.1| membrin 12 [Arabidopsis thaliana]
           gi|27805575|sp|Q9FK28.1|MEM12_ARATH RecName:
           Full=Membrin-12; Short=AtMEMB12; AltName: Full=Golgi
           SNAP receptor complex member 2-2
           gi|9758926|dbj|BAB09463.1| golgi SNARE protein
           [Arabidopsis thaliana] gi|26450177|dbj|BAC42207.1|
           putative golgi SNARE protein [Arabidopsis thaliana]
           gi|28827376|gb|AAO50532.1| putative Golgi SNARE protein
           [Arabidopsis thaliana] gi|332008563|gb|AED95946.1|
           membrin 12 [Arabidopsis thaliana]
          Length = 219

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   GLSNSVLRLIERRNRVDQWIKYAGMALTIIVLIAFWRWTR 122
           GLSNSVLRLIERRNRVD WIKYAGM  T+++L  F RWTR
Sbjct: 180 GLSNSVLRLIERRNRVDTWIKYAGMIATLVILYLFIRWTR 219


>ref|XP_002881481.1| MEMB11 [Arabidopsis lyrata subsp. lyrata]
           gi|297327320|gb|EFH57740.1| MEMB11 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 225

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   GLSNSVLRLIERRNRVDQWIKYAGMALTIIVLIAFWRWTR 122
           GLSNSVLRLIERRNRVD WIKYAGM  T+++L  F RWTR
Sbjct: 186 GLSNSVLRLIERRNRVDTWIKYAGMIATLVILYLFIRWTR 225


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