BLASTX nr result

ID: Angelica23_contig00026952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026952
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279621.1| PREDICTED: uncharacterized protein LOC100258...   120   9e-26
ref|XP_002308968.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_002313300.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002299946.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
gb|AFK35872.1| unknown [Lotus japonicus]                               94   9e-18

>ref|XP_002279621.1| PREDICTED: uncharacterized protein LOC100258531 [Vitis vinifera]
           gi|297736240|emb|CBI24878.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/92 (60%), Positives = 71/92 (77%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272 MDVAVIDWK--DSKFVKDDALENINAPQWVDFNAPFQPLDDDSWFCKPDCNHPKTVDDFL 99
           M+ A IDWK  DS+FV+D+  E+I+APQWVDFNAP + +DD++WFC+PDC HPKTV+DFL
Sbjct: 1   MEPAKIDWKTLDSRFVEDELYEHIHAPQWVDFNAPQEFVDDEAWFCRPDCKHPKTVEDFL 60

Query: 98  NKTPPSKLQRSASVSEILPFGDRTRREAALKK 3
             TP SK+  SA  SE LP GD  RR+A LK+
Sbjct: 61  ISTPNSKVLSSADKSETLPLGDWNRRDAKLKR 92


>ref|XP_002308968.1| predicted protein [Populus trichocarpa] gi|222854944|gb|EEE92491.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/95 (53%), Positives = 72/95 (75%), Gaps = 5/95 (5%)
 Frame = -2

Query: 272 MDVAVIDWK--DSKFVKDDALENINAPQWVDFNA-PFQPLDDDSWFCKPDCNHPKTVDDF 102
           M+  +IDW   DS F++DD  EN+NAP+WVDF+A P QP++D++WFCKP C HPKT++D+
Sbjct: 1   MEPGIIDWDSIDSVFIEDDTYENMNAPKWVDFSAFPEQPVNDEAWFCKPGCKHPKTIEDY 60

Query: 101 LNKTPPSKLQ--RSASVSEILPFGDRTRREAALKK 3
           L     SK++  +S ++SE+LPF DR RR+A LKK
Sbjct: 61  LKSKRGSKVKFLKSVTISEMLPFRDRNRRDAKLKK 95


>ref|XP_002313300.1| predicted protein [Populus trichocarpa] gi|222849708|gb|EEE87255.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/93 (52%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
 Frame = -2

Query: 272 MDVAVIDWK--DSKFVKDDALENINAPQWVDFNAPFQPLDDDSWFCKPDCNHPKTVDDFL 99
           M+ A IDWK  DS FV+D   EN+NAP+W DF AP    DD++WFC+PDCNHPKT DDF 
Sbjct: 1   MEPAKIDWKRIDSVFVEDRLYENLNAPKWFDFFAPEDSTDDEAWFCRPDCNHPKTADDFF 60

Query: 98  NKTPPSKLQRSAS-VSEILPFGDRTRREAALKK 3
             TP SKL  S        P  D+  R+A LK+
Sbjct: 61  KTTPTSKLSSSGDRARSRTPLDDKNLRDAKLKR 93


>ref|XP_002299946.1| predicted protein [Populus trichocarpa] gi|222847204|gb|EEE84751.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
 Frame = -2

Query: 272 MDVAVIDWK--DSKFVKDDALENINAPQWVDFNAPFQPLDDDSWFCKPDCNHPKTVDDFL 99
           M+   IDWK  DS FV+D   EN+NAP+W DF AP   +DD++WFC+PDCNHPKT +DF 
Sbjct: 1   MEPEKIDWKRIDSVFVEDRLYENVNAPKWFDFFAPEDSIDDEAWFCRPDCNHPKTAEDFF 60

Query: 98  NKTPPSKLQRSASVSEI-LPFGDRTRREAALKK 3
             TP SK   S   +    P  ++ +R+A  K+
Sbjct: 61  KTTPTSKFSSSGDKARSRTPLSEKNQRDAKSKR 93


>gb|AFK35872.1| unknown [Lotus japonicus]
          Length = 353

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
 Frame = -2

Query: 272 MDVAVIDWKDSKFVKDDALENINAPQWVDFNAPFQPLDDDSWFCKPDCNHPKTVDDFLNK 93
           +D+  ++W    FV+D+  E+INAP+WVDF +P    DD++WFCKPDC HPKT +DFL  
Sbjct: 6   IDLKRVEWN---FVEDELYEHINAPKWVDFLSPDHDKDDEAWFCKPDCKHPKTAEDFLRS 62

Query: 92  TPPSKLQRSASVS-EILPFGDRTRREAALKK 3
             P K  +S +   E  PFGD+ RR+  +K+
Sbjct: 63  PSPFKKSKSPAYGLENSPFGDQNRRDGRIKR 93


Top