BLASTX nr result

ID: Angelica23_contig00026943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026943
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26
emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]   120   9e-26
ref|XP_002511099.1| pentatricopeptide repeat-containing protein,...   104   6e-21
ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16

>ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/114 (56%), Positives = 77/114 (67%)
 Frame = -1

Query: 352 EITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKNIHVDPKILLHFFNWSSQQMGTPQN 173
           +I+  LK +NWK  + SSH+P KLNPDVIR+VLH+N   DPK LL FF WS  QMG PQ 
Sbjct: 44  QISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQF 103

Query: 172 LKSFLILALVLCKSNKFLLANGVLEQMISTRVPFSAILDCIVGFCRDYDDGSKV 11
           L SF ILA+ LC S  F LANGVL QMI T    S+ILD ++ + R+Y   S V
Sbjct: 104 LDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPV 157


>emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/114 (56%), Positives = 77/114 (67%)
 Frame = -1

Query: 352 EITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKNIHVDPKILLHFFNWSSQQMGTPQN 173
           +I+  LK +NWK  + SSH+P KLNPDVIR+VLH+N   DPK LL FF WS  QMG PQ 
Sbjct: 46  QISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQF 105

Query: 172 LKSFLILALVLCKSNKFLLANGVLEQMISTRVPFSAILDCIVGFCRDYDDGSKV 11
           L SF ILA+ LC S  F LANGVL QMI T    S+ILD ++ + R+Y   S V
Sbjct: 106 LDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPV 159


>ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550214|gb|EEF51701.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1151

 Score =  104 bits (260), Expect = 6e-21
 Identities = 55/121 (45%), Positives = 75/121 (61%)
 Frame = -1

Query: 379 SQNEDATIGEITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKNIHVDPKILLHFFNWS 200
           +   D T+ EIT +LK  NW+F +ESS +P KLNPDV+  V+ +N  +DPK L  FFNW 
Sbjct: 38  TNQSDNTVKEITSLLKQKNWQFLIESSPLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWV 97

Query: 199 SQQMGTPQNLKSFLILALVLCKSNKFLLANGVLEQMISTRVPFSAILDCIVGFCRDYDDG 20
           + +    QNL +F IL+L+LC S  F  A  VLE+MI TR P   ILD I+   ++ +  
Sbjct: 98  NSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGS 157

Query: 19  S 17
           S
Sbjct: 158 S 158


>ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|222868744|gb|EEF05875.1|
           predicted protein [Populus trichocarpa]
          Length = 1041

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 53/119 (44%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
 Frame = -1

Query: 379 SQNEDATIGEITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKNIHVDPKILLHFFNWS 200
           +QN    + EIT  L   NW+  L    V  KL+PDV+ SV+ K ++ DPK LL FFNW 
Sbjct: 35  TQNNSNIVNEITTFLNQKNWESLLPL--VSNKLSPDVVHSVITKQVN-DPKRLLDFFNWV 91

Query: 199 SQQMGTPQNLKSFLILALVLCKSNKFLLANGVLEQMI-STRVPFSAILDCIVGFCRDYD 26
             QMG  Q L+SF ILAL+LC S  F  A+ V+ QMI  +   +S ILD ++  C+++D
Sbjct: 92  QFQMGFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFD 150


>ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/123 (40%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
 Frame = -1

Query: 385 FSSQNE----DATIGEITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKNIHVDPKILL 218
           FS+ N     D T+ E + ILK  +W+  L +    RKLNP+++ SVL K+   D   L 
Sbjct: 45  FSTNNPFDHYDDTVREFSMILKRKDWQILLNNEDNVRKLNPEIVCSVLQKSEIDDSVRLQ 104

Query: 217 HFFNWSSQQMGTPQNLKSFLILALVLCKSNKFLLANGVLEQMISTRVPFSAILDCIVGFC 38
           +FF+WSS +M TPQ L S+ ILA+ LC S     A+ +LE+++ TR P   ILD +V   
Sbjct: 105 NFFHWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCY 164

Query: 37  RDY 29
           R++
Sbjct: 165 REF 167


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