BLASTX nr result

ID: Angelica23_contig00026920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026920
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|2...   259   3e-67
ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|2...   255   9e-66
ref|XP_002530980.1| conserved hypothetical protein [Ricinus comm...   238   1e-60
ref|XP_002534631.1| hypothetical protein RCOM_0173910 [Ricinus c...   148   1e-33
ref|XP_001767294.1| RNA helicase [Physcomitrella patens subsp. p...   106   5e-21

>ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|222852966|gb|EEE90513.1|
            predicted protein [Populus trichocarpa]
          Length = 687

 Score =  259 bits (663), Expect = 3e-67
 Identities = 140/264 (53%), Positives = 182/264 (68%), Gaps = 5/264 (1%)
 Frame = +1

Query: 1    QGSTLLYVIPEDVKGLIKKDIVPGILKKPLCPQTYKDYFAALLYAEDYYLEKWDGFEMKN 180
            +G + +Y IP+D++ LIK+D VPG+L KPL   TYKDYFAALLYAED+Y+EKW  F+++N
Sbjct: 238  KGMSPIYAIPKDIEDLIKRDKVPGVLNKPLSLSTYKDYFAALLYAEDFYIEKWSEFKLEN 297

Query: 181  VTLNLQEAEIHGRXXXXXXXXXXXXXXX-IFVEFEVDSIPEKRPFLLSRDFASVRPAGTK 357
            +TL LQ AEI  +                IFVEFE+DS  E+RPFLLSRDFA  RP+G  
Sbjct: 298  ITLKLQRAEIIKKSRRNEYRNETYEKDDKIFVEFEIDSCCERRPFLLSRDFAFARPSGQM 357

Query: 358  VDPFQGLILRVLRSNVVLVEFGDDFHAQHYSSCKYDVKFSFNRVCLKRAHQAIAAASDML 537
             +P QG+I RV RS  V+VEFG DF  QH+S+ KYDV FSFNRVCLKRAH AI AASD L
Sbjct: 358  TEPCQGIIYRVERSTRVVVEFGKDFLLQHHSTRKYDVSFSFNRVCLKRAHHAIEAASDPL 417

Query: 538  FTKFLFPDYRPNDSHFSKKV-SLTEKVLFSSPKLN---SSAISRIINLNGSPAYLVEGPL 705
            F  FLFPD        SKK+  ++  + F + KL+   SSA+  I++  G P Y+VEGPL
Sbjct: 418  FKSFLFPD------GVSKKIFPISTPLHFCNHKLDVYQSSAVREILSFQGPPPYIVEGPL 471

Query: 706  SVTRDKKLSRTGIVLRDAVVQLSQ 777
             + +  +LSRTG+V+++AV+Q+ Q
Sbjct: 472  CLNKFSELSRTGLVIQEAVLQIYQ 495


>ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|222855824|gb|EEE93371.1|
            predicted protein [Populus trichocarpa]
          Length = 773

 Score =  255 bits (651), Expect = 9e-66
 Identities = 135/259 (52%), Positives = 179/259 (69%), Gaps = 5/259 (1%)
 Frame = +1

Query: 16   LYVIPEDVKGLIKKDIVPGILKKPLCPQTYKDYFAALLYAEDYYLEKWDGFEMKNVTLNL 195
            +Y +P+D++ LIK+DIVP +L + L P TYKDYFAALLYAED+Y+EKW  F++KN+ L L
Sbjct: 325  IYAVPKDIEDLIKRDIVPEVLNEMLSPSTYKDYFAALLYAEDFYIEKWSKFKLKNIALKL 384

Query: 196  QEAEI-HGRXXXXXXXXXXXXXXXIFVEFEVDSIPEKRPFLLSRDFASVRPAGTKVDPFQ 372
            ++A I   R                FVEFE+DS  EKRPFLLSRDFA  RP+G K +P+Q
Sbjct: 385  KDAAIIKKRGRNEYFGESHEKDNKTFVEFEIDSCREKRPFLLSRDFAFARPSGQKTEPYQ 444

Query: 373  GLILRVLRSNVVLVEFGDDFHAQHYSSCKYDVKFSFNRVCLKRAHQAIAAASDMLFTKFL 552
            G+I RV+RS +VLVEFG+DF  QH+S+ +YDV FSFNRVCLKRAHQAI AASD  F  FL
Sbjct: 445  GVIYRVVRSTIVLVEFGEDFLLQHHSTREYDVSFSFNRVCLKRAHQAIEAASDPSFKNFL 504

Query: 553  FPDYRPNDSHFSKKVSLTEKVLFSSPKLNS---SAISRIINLNGSPAYLVEGPL-SVTRD 720
            FP++        K +  +  + F + KL++   SA+  I++  G P YLVEGPL S    
Sbjct: 505  FPNF-----VHRKSIPTSTPLHFINHKLDAYQRSAVHEILSFRGPPPYLVEGPLCSKEYS 559

Query: 721  KKLSRTGIVLRDAVVQLSQ 777
            K+LSR G+V+++AV+Q+ Q
Sbjct: 560  KQLSRIGLVVQEAVLQIYQ 578


>ref|XP_002530980.1| conserved hypothetical protein [Ricinus communis]
            gi|223529456|gb|EEF31415.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 710

 Score =  238 bits (606), Expect = 1e-60
 Identities = 132/272 (48%), Positives = 168/272 (61%), Gaps = 18/272 (6%)
 Frame = +1

Query: 10   TLLYVIPEDVKGLIKKDIVPGILKKPLCPQTYKDYFAALLYAEDYYLEKWDGFEMKNVTL 189
            T +Y+IP+D++ LIK D VP +LKKPL   TYKDYFAALLYAEDYY+EKW  F++  +T+
Sbjct: 272  TPIYMIPKDIESLIKSDKVPEVLKKPLSLSTYKDYFAALLYAEDYYIEKWSKFKLVGITI 331

Query: 190  NLQEAEIHGRXXXXXXXXXXXXXXXIFVEFEVDSIPEKRPFLLSRDFASVRPAGTKVDPF 369
             LQE  I  +                 V FE+DS  EKRPFLLSRDF   RP+G+  +PF
Sbjct: 332  KLQETAISKQIYFGKDYETDVKH---LVAFEIDSSHEKRPFLLSRDFVFARPSGSTTEPF 388

Query: 370  QGLILRVLRSNVVLVEFGDDFHAQHYSSCKYDVKFSFNRVCLKRAHQAIAAASDMLFTKF 549
            QG+I RV RS  VLVEFG+DFHAQH S  KYDV FSFNRVCL+RAHQAI AASD  F  F
Sbjct: 389  QGIIYRVQRSTTVLVEFGEDFHAQHCSFQKYDVSFSFNRVCLRRAHQAIEAASDPSFENF 448

Query: 550  LFPDYRPNDSHFSKKVSLTEKVLFSSPKLN---------SSAISRIINLNGSPAYLVEGP 702
            +FP +               ++  SSP LN         ++A+ RII +  SP YL+EGP
Sbjct: 449  IFPSWG------------LRRLSSSSPNLNYINKLDANLNAAVHRIITIMESPPYLLEGP 496

Query: 703  LSVTR---------DKKLSRTGIVLRDAVVQL 771
              V +          K+LS TG++++ AV ++
Sbjct: 497  PCVAKVEVKRKECNSKQLSSTGLIIQQAVFRI 528


>ref|XP_002534631.1| hypothetical protein RCOM_0173910 [Ricinus communis]
           gi|223524877|gb|EEF27754.1| hypothetical protein
           RCOM_0173910 [Ricinus communis]
          Length = 171

 Score =  148 bits (373), Expect = 1e-33
 Identities = 76/136 (55%), Positives = 90/136 (66%)
 Frame = +1

Query: 151 EKWDGFEMKNVTLNLQEAEIHGRXXXXXXXXXXXXXXXIFVEFEVDSIPEKRPFLLSRDF 330
           +KW  F++  +TL LQEA I                  IFV F +DS  EKRPFLLSRDF
Sbjct: 7   QKWSEFKLLGITLKLQEAAIF---KGPYIRESYEKDEKIFVAFNMDSSLEKRPFLLSRDF 63

Query: 331 ASVRPAGTKVDPFQGLILRVLRSNVVLVEFGDDFHAQHYSSCKYDVKFSFNRVCLKRAHQ 510
              + +G+K D FQG+I RV RS  +LVEFG+DFHAQHY S KYDV FSFNRVCLKRAHQ
Sbjct: 64  VFAKSSGSKTDLFQGIIYRVERSTTILVEFGEDFHAQHYPSMKYDVSFSFNRVCLKRAHQ 123

Query: 511 AIAAASDMLFTKFLFP 558
           A+ AASD  F  ++FP
Sbjct: 124 AVEAASDPSFESYIFP 139


>ref|XP_001767294.1| RNA helicase [Physcomitrella patens subsp. patens]
           gi|162681549|gb|EDQ67975.1| RNA helicase [Physcomitrella
           patens subsp. patens]
          Length = 885

 Score =  106 bits (265), Expect = 5e-21
 Identities = 75/232 (32%), Positives = 121/232 (52%), Gaps = 3/232 (1%)
 Frame = +1

Query: 16  LYVIPEDVK-GLIKKDIVPGILKKPLCPQTYKDYFAALLYAEDYYLE-KWDGFEMKNVTL 189
           +Y IP +VK  ++ K+ +P +  + L  + Y +YF+ L++AE+  +E     ++M+NVT+
Sbjct: 223 IYPIPPNVKEAILTKETLP-VFSEGLRKENYFEYFSTLMFAEELQMEVDIRAYDMQNVTM 281

Query: 190 NLQEAEIHGRXXXXXXXXXXXXXXXIFVEFEVDSIPEKRPFLLSRDFASVRPAGTKVDPF 369
                 + G                      V  + EKRP ++ RD    RP+GT    F
Sbjct: 282 WKVSHTLLG--------------------LRVPGLAEKRPSVIYRDKIYARPSGTTATEF 321

Query: 370 QGLILRVLRSNVVLVEFGDDFHAQHYSSCKYDVKFSFNRVCLKRAHQAIAAASDMLFTKF 549
           QG + +V ++N V + FGD F+    S+ +YD++FSF RV ++RAHQ I AA  +L   F
Sbjct: 322 QGYVHKV-QANEVHLRFGDAFNKGFISNSRYDIRFSFGRVNIRRAHQGIQAAKALL-DSF 379

Query: 550 LFP-DYRPNDSHFSKKVSLTEKVLFSSPKLNSSAISRIINLNGSPAYLVEGP 702
           LFP    P+ +  SKK++   +   +      SA+  I+   GSP YL+ GP
Sbjct: 380 LFPTTVVPSRTESSKKLTPFNRAANAE---QMSAVQEILKKRGSPPYLIYGP 428


Top