BLASTX nr result

ID: Angelica23_contig00026869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026869
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264349.1| PREDICTED: protein SCARECROW-like [Vitis vin...    81   8e-14
ref|XP_002326418.1| GRAS family transcription factor [Populus tr...    68   7e-10
ref|XP_002323112.1| GRAS family transcription factor [Populus tr...    67   2e-09
ref|XP_004163982.1| PREDICTED: uncharacterized protein LOC101230...    64   1e-08
ref|XP_004147549.1| PREDICTED: LOW QUALITY PROTEIN: protein SCAR...    64   1e-08

>ref|XP_002264349.1| PREDICTED: protein SCARECROW-like [Vitis vinifera]
          Length = 782

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 55/147 (37%), Positives = 73/147 (49%), Gaps = 17/147 (11%)
 Frame = -3

Query: 403 TGLAVYRGDVDNIAAASSVKHYNNWGLPQPATNSS---AVMPTDH------INPVMLSNQ 251
           +GL      + + AA+  + HY NWGL QP T ++   A   +DH      + PV+  NQ
Sbjct: 293 SGLDNLHYSLPDSAASHVMNHYLNWGLTQPPTTTADGQAQHLSDHQASPSSVAPVLSLNQ 352

Query: 250 I--------KXXXXXXXXXXXXXXXPLAAQVMDDAVVIREKKKQEIRQMKRDEEGXXXXX 95
           +        +                        A ++ ++KK+E RQ KRDEEG     
Sbjct: 353 VHPPQPAQPQQPQNSPQSAEPAGAAATITTAPTSAAIVTKEKKEETRQQKRDEEGLHLLT 412

Query: 94  XXLQCAEAVSADNFEEANTMLLEISEI 14
             LQCAEAVSADNFEEAN MLLEISE+
Sbjct: 413 LLLQCAEAVSADNFEEANKMLLEISEL 439


>ref|XP_002326418.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222833611|gb|EEE72088.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 847

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 54/162 (33%), Positives = 70/162 (43%), Gaps = 31/162 (19%)
 Frame = -3

Query: 406 PTGLAVYRGDVDNIA----AASSVKHYNNWG-----LPQPATNSSAVMP----------- 287
           P+GL++    V N A    ++  V HY+NWG     + QP        P           
Sbjct: 332 PSGLSLDLDHVSNSALPPVSSHVVSHYSNWGPTPPLICQPNIQQQHQQPQAHLVHDQQQQ 391

Query: 286 -----TDHINPVMLSNQIKXXXXXXXXXXXXXXXPLAAQVMDD------AVVIREKKKQE 140
                T ++ P +L+                       QV         +V     KK+E
Sbjct: 392 ESPSSTSNVTPTILALNQGHPPQQAQDQQQEKSSSAETQVASSTPPPSSSVAASRDKKEE 451

Query: 139 IRQMKRDEEGXXXXXXXLQCAEAVSADNFEEANTMLLEISEI 14
           +RQ KR+EEG       LQCAEAVSADNFEEAN MLLEISE+
Sbjct: 452 MRQQKRNEEGLHLLTLLLQCAEAVSADNFEEANKMLLEISEL 493


>ref|XP_002323112.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222867742|gb|EEF04873.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 770

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/46 (73%), Positives = 37/46 (80%)
 Frame = -3

Query: 151 KKQEIRQMKRDEEGXXXXXXXLQCAEAVSADNFEEANTMLLEISEI 14
           KK+E+RQ KRDEEG       LQCAEAVSADNFEEAN MLLEISE+
Sbjct: 363 KKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNFEEANKMLLEISEL 408


>ref|XP_004163982.1| PREDICTED: uncharacterized protein LOC101230653 [Cucumis sativus]
          Length = 858

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = -3

Query: 172 AVVIREKKKQEIRQMKRDEEGXXXXXXXLQCAEAVSADNFEEANTMLLEISEI 14
           A++IRE K +E+RQ KRDEEG       LQCAEAVSADN EEAN MLLEISE+
Sbjct: 453 ALLIREIK-EEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISEL 504


>ref|XP_004147549.1| PREDICTED: LOW QUALITY PROTEIN: protein SCARECROW-like [Cucumis
           sativus]
          Length = 859

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = -3

Query: 172 AVVIREKKKQEIRQMKRDEEGXXXXXXXLQCAEAVSADNFEEANTMLLEISEI 14
           A++IRE K +E+RQ KRDEEG       LQCAEAVSADN EEAN MLLEISE+
Sbjct: 453 ALLIREIK-EEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISEL 504


Top