BLASTX nr result

ID: Angelica23_contig00026843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026843
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis...    59   5e-07
ref|XP_002320976.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002312692.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
emb|CAN78916.1| hypothetical protein VITISV_032223 [Vitis vinifera]    55   5e-06
ref|XP_002333975.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis vinifera]
          Length = 1110

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
 Frame = -2

Query: 328  VWLDKPGARNIQFQGLDTDKLPPNDLIIFKPFHGSRLYHIVSEFHALXXXXXXXXXXXIT 149
            VWLDKP  R++ F+ +  + + PNDL++ KPFHGSRLY +      L             
Sbjct: 867  VWLDKPTLRSVNFRDVPEEMISPNDLVMLKPFHGSRLYQVAK---LLPEFGGPMLGISAI 923

Query: 148  SSI*KFPSEPNTTSAKIVITSSHESSAKSIQNL-QGDVKELNGPGNKKPL 2
            S + K   EP+ +S      ++   S   ++ + + +++E+    N+ PL
Sbjct: 924  SQVGKAGPEPSLSSLPTTNRTTPRKSRSRVRLVKEPEIQEVGTSSNQNPL 973


>ref|XP_002320976.1| predicted protein [Populus trichocarpa] gi|222861749|gb|EEE99291.1|
            predicted protein [Populus trichocarpa]
          Length = 1130

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
 Frame = -2

Query: 331  IVWLDKPGARNIQFQGLDTDKLPPNDLIIFKPFHGSRLYHIV---SEF--HALXXXXXXX 167
            +VWLDKP +R+I  +  + D + P D I+ KPFHGSRLY ++    EF  H L       
Sbjct: 854  VVWLDKPTSRSINLRSFEQDLIDPRDDILLKPFHGSRLYQVIRLLPEFGGHELISRSKRE 913

Query: 166  XXXXITSSI*KFPSEPNTT---SAKIVITSSHESSAKSIQNLQGDVKELNGPGNKKPL 2
                 T+++ K P   ++T     K+ + S+ E+S + + + Q +    N    K PL
Sbjct: 914  NAIQATNAL-KDPGSSSSTHSQKTKLKVPSTCENSFQQVDS-QAEGSSKNEKNRKNPL 969


>ref|XP_002312692.1| predicted protein [Populus trichocarpa] gi|222852512|gb|EEE90059.1|
            predicted protein [Populus trichocarpa]
          Length = 1136

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
 Frame = -2

Query: 331  IVWLDKPGARNIQFQGLDTDKLPPNDLIIFKPFHGSRLYHIV---SEFHALXXXXXXXXX 161
            +VWLDKP +R+I  +G + D + P D I+ KPFHGSRLY ++    EF A          
Sbjct: 854  VVWLDKPTSRSINLRGFEHDLINPRDDILLKPFHGSRLYQVIRLLPEFGA---------- 903

Query: 160  XXITSSI*KFPSEPNTT---SAKIVITSSHESSAKSIQNLQGDVKELNGPGNKKPL 2
               T+++ K P   ++T     K+ + S+ E+S + + + Q +    N    K PL
Sbjct: 904  ---TNAL-KDPGSSSSTHSQGTKLKVPSTCENSFQQVDS-QAEGSSKNEKNRKNPL 954


>emb|CAN78916.1| hypothetical protein VITISV_032223 [Vitis vinifera]
          Length = 1143

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 21/40 (52%), Positives = 30/40 (75%)
 Frame = -2

Query: 328  VWLDKPGARNIQFQGLDTDKLPPNDLIIFKPFHGSRLYHI 209
            VWLDKP  R++ F+ +  + + PNDL++ KPFHGSRLY +
Sbjct: 900  VWLDKPTLRSVNFRDVPEEMISPNDLVMLKPFHGSRLYQV 939


>ref|XP_002333975.1| predicted protein [Populus trichocarpa] gi|222839404|gb|EEE77741.1|
            predicted protein [Populus trichocarpa]
          Length = 1119

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
 Frame = -2

Query: 331  IVWLDKPGARNIQFQGLDTDKLPPNDLIIFKPFHGSRLYHIV---SEFHALXXXXXXXXX 161
            +VWLDK  +R++  +G + D + P D I+ KPFHGSRLY ++    EF A          
Sbjct: 848  VVWLDKQTSRSMNLRGFEQDLIDPRDDILLKPFHGSRLYQVIRLLPEFGA---------- 897

Query: 160  XXITSSI*KFPSEPNTT---SAKIVITSSHESSAKSIQNLQGDVKELNGPGNKKPL 2
                +++ K P   ++T     K+ + S+ E+S + + + Q +    N    K PL
Sbjct: 898  ----TNVLKDPGSSSSTHSQKTKLKVPSTCENSFQQVDS-QAEGSSKNEKNRKNPL 948


Top