BLASTX nr result

ID: Angelica23_contig00026830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026830
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002305655.1| f-box family protein [Populus trichocarpa] g...    99   3e-19
ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis ...    93   2e-17
emb|CBI23311.3| unnamed protein product [Vitis vinifera]               93   2e-17
emb|CBI23307.3| unnamed protein product [Vitis vinifera]               92   7e-17

>ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|222859725|gb|EEE97272.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  100 bits (250), Expect = 1e-19
 Identities = 58/106 (54%), Positives = 73/106 (68%), Gaps = 12/106 (11%)
 Frame = -1

Query: 548 QDILVRILCGVEHDDLKRLFDVSKSVRAATVIAKQWHFAYSTPTKKLAFKDPDEFENSG- 372
           QDIL+R+LCGV+HDDLK+LF VSK +R AT+IAK+WHFAYSTP K  AF+   +F N   
Sbjct: 84  QDILIRVLCGVDHDDLKQLFHVSKVIREATLIAKEWHFAYSTPRKTQAFRTRIDFGNPSG 143

Query: 371 ----EAPNAPKQSRT-QSRLNGKNQRLLSRRLF------MELETEI 267
               EAPNAPKQ R+ +S LN K+   +S  LF      + +ETEI
Sbjct: 144 LDEIEAPNAPKQRRSYKSLLNRKSIADVSVALFASPKKGLFMETEI 189


>ref|XP_002305655.1| f-box family protein [Populus trichocarpa]
           gi|222848619|gb|EEE86166.1| f-box family protein
           [Populus trichocarpa]
          Length = 189

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 6/93 (6%)
 Frame = -1

Query: 548 QDILVRILCGVEHDDLKRLFDVSKSVRAATVIAKQWHFAYSTPTKKLAFKDPDEFENSG- 372
           QDIL+R+LC V+HDDLK+LF VSK +R AT+IAK+ HFAYSTP K   F+ P + EN G 
Sbjct: 84  QDILIRVLCRVDHDDLKQLFHVSKVIREATLIAKESHFAYSTPRKSQGFRSPFDLENPGE 143

Query: 371 ----EAPNAPKQSRT-QSRLNGKNQRLLSRRLF 288
               EAPNAPKQ R+ +SRLN K+   +S  LF
Sbjct: 144 LDEIEAPNAPKQRRSYKSRLNRKSIADVSVALF 176


>ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis vinifera]
          Length = 172

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 6/93 (6%)
 Frame = -1

Query: 548 QDILVRILCGVEHDDLKRLFDVSKSVRAATVIAKQWHFAYSTPTKKLAFKDP-DEFENSG 372
           QDIL+RILCGV+HDDLK+LF VS ++R AT+IAK+ HFAYSTP+K   F+ P D  E+SG
Sbjct: 75  QDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAYSTPSKVQTFRSPLDPEESSG 134

Query: 371 ----EAPNAPKQSR-TQSRLNGKNQRLLSRRLF 288
               + P+APKQSR  +SRL G+    ++  LF
Sbjct: 135 FDDLQTPDAPKQSRHFRSRLRGRKLSGIAIALF 167


>emb|CBI23311.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 6/93 (6%)
 Frame = -1

Query: 548 QDILVRILCGVEHDDLKRLFDVSKSVRAATVIAKQWHFAYSTPTKKLAFKDP-DEFENSG 372
           QDIL+RILCGV+HDDLK+LF VS ++R AT+IAK+ HFAYSTP+K   F+ P D  E+SG
Sbjct: 333 QDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAYSTPSKVQTFRSPLDPEESSG 392

Query: 371 ----EAPNAPKQSR-TQSRLNGKNQRLLSRRLF 288
               + P+APKQSR  +SRL G+    ++  LF
Sbjct: 393 FDDLQTPDAPKQSRHFRSRLRGRKLSGIAIALF 425


>emb|CBI23307.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score = 91.7 bits (226), Expect = 7e-17
 Identities = 51/93 (54%), Positives = 68/93 (73%), Gaps = 6/93 (6%)
 Frame = -1

Query: 548 QDILVRILCGVEHDDLKRLFDVSKSVRAATVIAKQWHFAYSTPTKKLAFKDP-DEFENSG 372
           QDIL+RILCGV+HDDLK+LF VS ++R AT+IAK+ HFA+STP+K   F+ P D  E+SG
Sbjct: 16  QDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAFSTPSKVQTFRSPLDPEESSG 75

Query: 371 ----EAPNAPKQSR-TQSRLNGKNQRLLSRRLF 288
               + P+APKQSR  +SRL G+    ++  LF
Sbjct: 76  FDDLQTPDAPKQSRHFRSRLRGRRLSGIAIALF 108


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