BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026826
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               286   8e-75
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     271   3e-70
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...   270   6e-70
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                266   6e-69
gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subc...   252   1e-64

>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  286 bits (732), Expect = 8e-75
 Identities = 167/418 (39%), Positives = 239/418 (57%), Gaps = 3/418 (0%)
 Frame = +3

Query: 3    RFISKLAERYLPFFDTLRGASSTKTVKWTPECQADFDDLKAYLSSXXXXXXXXXXXXXXI 182
            RF+ KLAER  P    L+    T   +WT EC+ +F  LKA+L+S              +
Sbjct: 1144 RFVPKLAERTRPIIKLLK---KTSKFEWTDECEQNFQQLKAFLASPPVIQKPNAREPIVV 1200

Query: 183  YLSVSNAAVGAVLIKEDEGGQKPIYYVSQVLKDAETRYPPVEKFAYAPVTASRKLRHYFQ 362
            YL+VSN AV + L++E +  ++P+Y+VS+VL DAETRY  VEK A+A V  +R++R YFQ
Sbjct: 1201 YLAVSNEAVSSALVQEIKAEERPVYFVSRVLHDAETRYQMVEKVAFALVITARRMRMYFQ 1260

Query: 363  GREIKVITNXXXXXXXXXXDLSGRLINWAVELSQFSISYEPRKAIKAQALSDFIVECSFG 542
              ++ V TN          DL+GR+I WAVELS+F I Y+PR AIK+QAL+DF       
Sbjct: 1261 NHKVIVRTNYPIMKILTKPDLAGRMIGWAVELSEFHIEYQPRGAIKSQALADF------- 1313

Query: 543  NQEKMPTFEDNPSANEPVFPPNPTWKLFVDASSTSTRSGAGLILISPEGF---QAIRFTF 713
                  T E  P   E      P W L+VD SS S  SGAG++L  P      QA++F F
Sbjct: 1314 ------TAELTPYLTE----RTPRWTLYVDGSSNSRSSGAGVVLEGPGEIVVEQAMKFEF 1363

Query: 714  KATNNQVEYEALIAGLNLARNLQVQHLSIFSDSQIVVRQTTGDYATKDITLTKYQALVKS 893
            K +NNQ EYEA+IAGL+LA  L+V +++  SDS++VV Q TG+Y  ++  L +Y   VK+
Sbjct: 1364 KTSNNQAEYEAIIAGLHLAIELEVTNITCKSDSRLVVGQLTGEYEVRETLLQQYFHFVKN 1423

Query: 894  FLSLFVSHTLVQVDRDDNTIADLLSKLVESEKDQLDGYVYFEELKVPTIEGQQIMEVGTA 1073
             L+ F   +   V R++NT AD LS+L   +K           L  P++  ++ M   T 
Sbjct: 1424 LLNRFKEISFQHVRRENNTRADALSRLATLKKKGAHRSAIHVTLAKPSVGTEECMATDT- 1482

Query: 1074 DSTWMTPIIDYLKENILPEDSSKAKQIRSQAAKYFIQNDTLYKRTFDSPILKCVDPDE 1247
               WMTPI  YL + +   D    K ++ QAA+Y +  + LY+R +  P+LKC+ P++
Sbjct: 1483 QPNWMTPIKQYLTDGVC--DPHLEKTMKLQAARYILIGEDLYRRGYSRPLLKCLGPEQ 1538


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  271 bits (692), Expect = 3e-70
 Identities = 157/419 (37%), Positives = 234/419 (55%), Gaps = 6/419 (1%)
 Frame = +3

Query: 3    RFISKLAERYLPFFDTLRGASSTKTVKWTPECQADFDDLKAYLSSXXXXXXXXXXXXXXI 182
            RFIS+  ++  PFF  L+G    K   W  E    F  LKA+L +              +
Sbjct: 553  RFISRSTDKSTPFFKVLKG---NKDFSWGEEQSTAFRQLKAHLITLPTLSRPMLGETLYL 609

Query: 183  YLSVSNAAVGAVLIKEDEGGQKPIYYVSQVLKDAETRYPPVEKFAYAPVTASRKLRHYFQ 362
            Y++V++A V AV+I+E++  Q PIY++S  L  AET YP +EK A+A V A+RKL+ YF 
Sbjct: 610  YIAVTSATVSAVIIREEDKQQHPIYFISHTLLAAETNYPLIEKAAFAVVVAARKLKPYFN 669

Query: 363  GREIKVITNXXXXXXXXXXDLSGRLINWAVELSQFSISYEPRKAIKAQALSDFIVECSFG 542
               + V+T+          + SGRLI WAVELS F I Y+PR +IK QAL+DF+ EC++ 
Sbjct: 670  AHPVTVLTDQPLEKALENFEKSGRLIKWAVELSGFGIQYKPRPSIKGQALADFLAECTYQ 729

Query: 543  NQEKMPTFEDNPSANEPVFPPNP-TWKLFVDASSTSTRSGAGLILISPEGFQ---AIRFT 710
             +                  PNP  W+++ D SST+  SGAG+++ISP G +   A++FT
Sbjct: 730  EE------------------PNPGVWEVYTDGSSTTNSSGAGILIISPNGDEFEYALKFT 771

Query: 711  FKATNNQVEYEALIAGLNLARNLQVQHLSIFSDSQIVVRQTTGDYATKDITLTKYQALVK 890
            F A+NN+ EYEA+I G+ LAR    +H+ + +DS +V  Q  G+Y  +D  + +Y   VK
Sbjct: 772  FSASNNESEYEAVITGVELARAAGAEHIVLKTDSLLVTNQIRGEYEARDDGMVRYLERVK 831

Query: 891  SFLSLFVSHTLVQVDRDDNTIADLLSKLVESEKDQLDGYVYFEELKVPTIEGQQIMEVG- 1067
            +  +   S  +  + R +N  AD LSKL  S    +   V  +     +I  + +  VG 
Sbjct: 832  ADTAKLKSFQIQCIPRSENNRADTLSKLTSSTIKNVSRTVLVDIRNAKSIT-ETVGMVGD 890

Query: 1068 -TADSTWMTPIIDYLKENILPEDSSKAKQIRSQAAKYFIQNDTLYKRTFDSPILKCVDP 1241
              A++TWMTPI+ Y     LPED S +++I+  AA+Y +    LY+R+   P+LKCV P
Sbjct: 891  IEAETTWMTPIMKYKLTKGLPEDRSLSQKIKRIAARYLVFEGELYRRSVIRPLLKCVGP 949


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
            gi|323435157|ref|YP_004222375.1| hypothetical protein
            BevumaM_p142 [Beta vulgaris subsp. maritima]
            gi|346683249|ref|YP_004842181.1| hypothetical protein
            BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
            orf764 [Beta vulgaris subsp. vulgaris]
            gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
            vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
            hypothetical protein [Beta vulgaris subsp. maritima]
            gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
            vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
            hypothetical protein [Beta macrocarpa]
            gi|384977907|emb|CBL54131.1| hypothetical protein
            (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score =  270 bits (690), Expect = 6e-70
 Identities = 160/416 (38%), Positives = 223/416 (53%), Gaps = 1/416 (0%)
 Frame = +3

Query: 3    RFISKLAERYLPFFDTLRGASSTKTVKWTPECQADFDDLKAYLSSXXXXXXXXXXXXXXI 182
            RFISK A++ LPFF  LRG    KT KW  E +  F  +K +L                +
Sbjct: 12   RFISKSADKALPFFQLLRG---NKTFKWGEEERTAFAAIKEHLKKLPTVTRPKEGERLQL 68

Query: 183  YLSVSNAAVGAVLIKEDEGGQKPIYYVSQVLKDAETRYPPVEKFAYAPVTASRKLRHYFQ 362
            Y+S S   V AVL+ E    Q PIY+VS VL +AE RYP +EK + A + A+RKLR YF 
Sbjct: 69   YISASPKTVAAVLLVERIKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFD 128

Query: 363  GREIKVITNXXXXXXXXXXDLSGRLINWAVELSQFSISYEPRKAIKAQALSDFIVECSFG 542
               I+V++N          D SGRL+ WAVELS+F + Y+PR AIKAQAL+DFIVE S+ 
Sbjct: 129  AHTIQVLSNHPLEKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFIVEASYE 188

Query: 543  NQEKMPTFEDNPSANEPVFPPNPTWKLFVDASSTSTRSGAGLILISPEG-FQAIRFTFKA 719
             +E+                P   WKL VD S+  T SGAG+I+ SPEG        FKA
Sbjct: 189  EEEE----------------PVGVWKLAVDGSAAQTGSGAGIIMTSPEGNVFEYAIKFKA 232

Query: 720  TNNQVEYEALIAGLNLARNLQVQHLSIFSDSQIVVRQTTGDYATKDITLTKYQALVKSFL 899
            +NN+ EYEA IAG+ +      + + + +DSQ+V  Q  G+Y  ++  + KY  ++K   
Sbjct: 233  SNNEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMIKDLA 292

Query: 900  SLFVSHTLVQVDRDDNTIADLLSKLVESEKDQLDGYVYFEELKVPTIEGQQIMEVGTADS 1079
            +  +S  +V V R DN+ AD LSKL  S    L+  V  E ++  +I+  + +   TA  
Sbjct: 293  AQLISLEVVLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSIDKAERINCVTAQK 352

Query: 1080 TWMTPIIDYLKENILPEDSSKAKQIRSQAAKYFIQNDTLYKRTFDSPILKCVDPDE 1247
             W   I +Y     LP+D + AK ++  +  Y I    LYKR+   P+L+C    E
Sbjct: 353  EWYDDIQEYKLTGKLPDDQTIAKAVKRDSHWYIIYQGQLYKRSDSYPLLRCTSESE 408


>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  266 bits (681), Expect = 6e-69
 Identities = 158/416 (37%), Positives = 222/416 (53%), Gaps = 1/416 (0%)
 Frame = +3

Query: 3    RFISKLAERYLPFFDTLRGASSTKTVKWTPECQADFDDLKAYLSSXXXXXXXXXXXXXXI 182
            RFIS+ A++ LPFF  LRG    KT  W  E +  F  +K +L                +
Sbjct: 12   RFISRSADKALPFFQLLRG---NKTFTWGEEERTAFAAIKEHLKKLPTVTRPKEGERLQL 68

Query: 183  YLSVSNAAVGAVLIKEDEGGQKPIYYVSQVLKDAETRYPPVEKFAYAPVTASRKLRHYFQ 362
            Y+S S   V AVL+ E    Q PIY+VS VL +AE RYP +EK + A + A+RKLR YF 
Sbjct: 69   YISASPKTVAAVLLVERIKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFD 128

Query: 363  GREIKVITNXXXXXXXXXXDLSGRLINWAVELSQFSISYEPRKAIKAQALSDFIVECSFG 542
               I+V++N          D SGRL+ WAVELS+F + Y+PR AIKAQAL+DFIVE S+ 
Sbjct: 129  AHTIQVLSNHPLEKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFIVEASYE 188

Query: 543  NQEKMPTFEDNPSANEPVFPPNPTWKLFVDASSTSTRSGAGLILISPEG-FQAIRFTFKA 719
             +E+                P   WKL VD S+  T SGAG+I+ SPEG        FKA
Sbjct: 189  EEEE----------------PVGVWKLAVDGSAAQTGSGAGIIMTSPEGNVFEYAIKFKA 232

Query: 720  TNNQVEYEALIAGLNLARNLQVQHLSIFSDSQIVVRQTTGDYATKDITLTKYQALVKSFL 899
            +NN+ EYEA IAG+ +      + + + +DSQ+V  Q  G+Y  ++  + KY  ++K   
Sbjct: 233  SNNEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMIKDLA 292

Query: 900  SLFVSHTLVQVDRDDNTIADLLSKLVESEKDQLDGYVYFEELKVPTIEGQQIMEVGTADS 1079
            +  +S  +V V R DN+ AD LSKL  S    L+  V  E ++  +I+  + +   TA  
Sbjct: 293  AQLISLEVVLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSIDKAERINCVTAQK 352

Query: 1080 TWMTPIIDYLKENILPEDSSKAKQIRSQAAKYFIQNDTLYKRTFDSPILKCVDPDE 1247
             W   I +Y     LP+D + AK ++  +  Y I    LYKR+   P+L+C    E
Sbjct: 353  EWYDDIQEYKLTGKLPDDQTIAKAVKRDSHWYIIYQGQLYKRSDSYPLLRCTSESE 408


>gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1908

 Score =  252 bits (644), Expect = 1e-64
 Identities = 152/421 (36%), Positives = 220/421 (52%), Gaps = 10/421 (2%)
 Frame = +3

Query: 3    RFISKLAERYLPFFDTLRGASSTKTVKWTPECQADFDDLKAYLSSXXXXXXXXXXXXXXI 182
            RF+SK AER LPFF TLRGA       WTPECQA FD+LK YL S              +
Sbjct: 1151 RFLSKAAERGLPFFKTLRGAGK---FNWTPECQAAFDELKQYLQSPPALISPPPGSELLL 1207

Query: 183  YLSVSNAAVGAVLIKEDEGGQKPIYYVSQVLKDAETRYPPVEKFAYAPVTASRKLRHYFQ 362
            YL+ S  A+ A L++E E GQKP+Y+VS+ L+ A+TRY  +EK AYA V ASRKL+HYFQ
Sbjct: 1208 YLAASPVAISAALVQETESGQKPVYFVSEALQGAKTRYIEMEKLAYALVMASRKLKHYFQ 1267

Query: 363  GREIKVITNXXXXXXXXXXDLSGRLINWAVELSQFSISYEPRKAIKAQALSDFIVECSFG 542
              ++ V +           +++GRL  WA ELS F + +    AIK+Q L+DF+ E +  
Sbjct: 1268 ANKVIVPSQYPLGEILRGKEVTGRLSKWAAELSPFDLYFVAHSAIKSQVLADFVAEWT-- 1325

Query: 543  NQEKMPTFEDNPSANEPVFPPNPTWKLFVDASSTSTRSGAGLILISPEGF---QAIRFTF 713
                 P    +P       P    W +  D S +   +G   +L SP G     A R  F
Sbjct: 1326 -----PILAPDPE------PAEQFWVMCSDGSWSHKGAGVATVLFSPNGVPIRYAARLQF 1374

Query: 714  KATNNQVEYEALIAGLNLARNLQVQHLSIFSDSQIVVRQTTGDYATKDITLTKYQALVKS 893
              TNN  EYEA++ GL  A+ L V+ L I +DS++V       +  K+  + KY   V+S
Sbjct: 1375 DTTNNVAEYEAVLLGLRKAKALGVRRLLIRTDSKLVAGHVDKSFEAKEEGMKKYLEAVRS 1434

Query: 894  FLSLFVSHTLVQVDRDDNTIADLLSKLVESEKDQLDGYVYFEELKVPTI--EGQQIMEV- 1064
                F   T+  + RD N  AD L+K          G ++FE L  P++  +  ++M + 
Sbjct: 1435 MEKCFTGITVKHLPRDQNEEADALAKSAACGGPHSPG-IFFEVLHAPSVPMDCSEVMAID 1493

Query: 1065 ----GTADSTWMTPIIDYLKENILPEDSSKAKQIRSQAAKYFIQNDTLYKRTFDSPILKC 1232
                G     W TP + +L+   LP D ++AK+++ +A KY + +  LY+     P+L+C
Sbjct: 1494 REKRGEDPHDWRTPFVKHLETGWLPVDEAEAKRLQLRATKYKMVSGQLYRTGVLQPLLRC 1553

Query: 1233 V 1235
            +
Sbjct: 1554 I 1554