BLASTX nr result

ID: Angelica23_contig00026730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026730
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38601.1| unknown [Lotus japonicus]                               54   2e-11
ref|NP_199233.1| nuclear cap-binding protein subunit 2 [Arabidop...    52   4e-11
ref|XP_002863606.1| cap-binding protein 20 [Arabidopsis lyrata s...    52   4e-11
ref|XP_002309756.1| predicted protein [Populus trichocarpa] gi|1...    52   4e-11
ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subun...    52   4e-11

>gb|AFK38601.1| unknown [Lotus japonicus]
          Length = 253

 Score = 53.9 bits (128), Expect(2) = 2e-11
 Identities = 21/23 (91%), Positives = 23/23 (100%)
 Frame = +1

Query: 1   KNTKTPCGFCFIMYYSREDTEDA 69
           KNTKTPCGFCF++YYSREDTEDA
Sbjct: 69  KNTKTPCGFCFVLYYSREDTEDA 91



 Score = 41.2 bits (95), Expect(2) = 2e-11
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 69  LSGTILDDRPIGVDFDWGF 125
           +SGTILDDRPI VDFDWGF
Sbjct: 95  VSGTILDDRPIRVDFDWGF 113


>ref|NP_199233.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
           gi|145334719|ref|NP_001078705.1| nuclear cap-binding
           protein subunit 2 [Arabidopsis thaliana]
           gi|75338554|sp|Q9XFD1.1|NCBP2_ARATH RecName:
           Full=Nuclear cap-binding protein subunit 2; AltName:
           Full=20 kDa nuclear cap-binding protein; AltName:
           Full=NCBP 20 kDa subunit; Short=AtCBP20
           gi|4768968|gb|AAD29697.1|AF140219_1 nuclear cap-binding
           protein [Arabidopsis thaliana]
           gi|9759521|dbj|BAB10987.1| nuclear cap-binding protein;
           CBP20 [Arabidopsis thaliana] gi|28466941|gb|AAO44079.1|
           At5g44200 [Arabidopsis thaliana]
           gi|110735694|dbj|BAE99827.1| nuclear cap-binding protein
           [Arabidopsis thaliana] gi|332007690|gb|AED95073.1|
           nuclear cap-binding protein subunit 2 [Arabidopsis
           thaliana] gi|332007691|gb|AED95074.1| nuclear
           cap-binding protein subunit 2 [Arabidopsis thaliana]
          Length = 257

 Score = 52.4 bits (124), Expect(2) = 4e-11
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +1

Query: 1   KNTKTPCGFCFIMYYSREDTEDA 69
           KNTKTPCGFCF+++YSREDTEDA
Sbjct: 69  KNTKTPCGFCFVLFYSREDTEDA 91



 Score = 41.6 bits (96), Expect(2) = 4e-11
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 69  LSGTILDDRPIGVDFDWGF 125
           +SGTILDDRPI VDFDWGF
Sbjct: 95  ISGTILDDRPIRVDFDWGF 113


>ref|XP_002863606.1| cap-binding protein 20 [Arabidopsis lyrata subsp. lyrata]
           gi|297309441|gb|EFH39865.1| cap-binding protein 20
           [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score = 52.4 bits (124), Expect(2) = 4e-11
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +1

Query: 1   KNTKTPCGFCFIMYYSREDTEDA 69
           KNTKTPCGFCF+++YSREDTEDA
Sbjct: 69  KNTKTPCGFCFVLFYSREDTEDA 91



 Score = 41.6 bits (96), Expect(2) = 4e-11
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 69  LSGTILDDRPIGVDFDWGF 125
           +SGTILDDRPI VDFDWGF
Sbjct: 95  ISGTILDDRPIRVDFDWGF 113


>ref|XP_002309756.1| predicted protein [Populus trichocarpa] gi|118488601|gb|ABK96113.1|
           unknown [Populus trichocarpa]
           gi|222852659|gb|EEE90206.1| predicted protein [Populus
           trichocarpa]
          Length = 255

 Score = 52.4 bits (124), Expect(2) = 4e-11
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +1

Query: 1   KNTKTPCGFCFIMYYSREDTEDA 69
           KN+KTPCGFCF++YYSREDTEDA
Sbjct: 69  KNSKTPCGFCFVLYYSREDTEDA 91



 Score = 41.6 bits (96), Expect(2) = 4e-11
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 69  LSGTILDDRPIGVDFDWGF 125
           +SGTILDDRPI VDFDWGF
Sbjct: 95  ISGTILDDRPIRVDFDWGF 113


>ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
           sativus] gi|449476391|ref|XP_004154724.1| PREDICTED:
           nuclear cap-binding protein subunit 2-like [Cucumis
           sativus]
          Length = 251

 Score = 52.4 bits (124), Expect(2) = 4e-11
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +1

Query: 1   KNTKTPCGFCFIMYYSREDTEDA 69
           KN+KTPCGFCF++YYSREDTEDA
Sbjct: 69  KNSKTPCGFCFVLYYSREDTEDA 91



 Score = 41.6 bits (96), Expect(2) = 4e-11
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 69  LSGTILDDRPIGVDFDWGF 125
           +SGTILDDRPI VDFDWGF
Sbjct: 95  ISGTILDDRPIRVDFDWGF 113


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