BLASTX nr result

ID: Angelica23_contig00026691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026691
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB45089.1| putative polyprotein [Solanum habrochaites]             69   5e-10
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]    68   7e-10
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]       66   3e-09
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]    66   3e-09
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]    66   3e-09

>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
 Frame = -2

Query: 348 VLYVPDFKFNLISIPKICKDLSCSITFTDEECFLQGL-SMRPLLLNNFKHGLYYLEDSAN 172
           VLY+PDFK+NL+S+ ++ K+L C + F  + C LQ L +++     + ++GLYY      
Sbjct: 186 VLYIPDFKYNLLSVSELTKELHCCMVFYPDHCILQDLHTVKVKGTGSMENGLYY------ 239

Query: 171 KGSDMIQPSVSSVNTTSLHKNKNEVDKVKLWHLRMGHLPPAMFQHIK 31
             S ++ P+V+   + S+    + +D V LWH R+GH+P  + Q ++
Sbjct: 240 -WSHIVSPTVAYSVSPSV--ALSTLDDVDLWHRRLGHIPHKVLQQMQ 283


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
 Frame = -2

Query: 348 VLYVPDFKFNLISIPKICKDLSCSITFTDEECFLQGLSMRPLL-LNNFKHGLYYLEDSAN 172
           VL VP FK +L+S+ ++ KDL+CS+TF    C LQ L+ R  + L   + GLYYL   A+
Sbjct: 165 VLGVPSFKVDLMSVSRVTKDLNCSVTFFPHWCILQDLTTRTTIGLGEQRDGLYYLVALAS 224

Query: 171 KGSDMIQPSVSSVNTTSLHKNKNEV-DKVKLWHLRMGHLPPA----MFQHIKN 28
           +      PS +   TTS     ++V     LWH R+GHL  +    M +H+ N
Sbjct: 225 EKPKTQTPSAA---TTSCRSPSSQVTSSTALWHRRLGHLSSSRLDFMAKHLLN 274


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/116 (37%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
 Frame = -2

Query: 348 VLYVPDFKFNLISIPKICKDLSCSITFTDEECFLQGLSMRPLL-LNNFKHGLYYLEDSAN 172
           VLY P F  NLIS+ K+CK LSC + F+ + C +Q LS + ++ L    HGLY L  SA+
Sbjct: 445 VLYCPTFNLNLISVSKMCKSLSCFVNFSTDSCIIQELSTKRMIGLGENIHGLYRLVVSAD 504

Query: 171 KGSDMIQPS--------VSSVNTTSLHKNKNEVDKVKLWHLRMGHLPPAMFQHIKN 28
                  PS        VS  N +  H     +    LWH RMGHL      H+++
Sbjct: 505 ---SFQSPSHRFNNNLFVSCNNVSQSH--FIVIPNSALWHYRMGHLSHQRLSHMQS 555


>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
          Length = 1322

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
 Frame = -2

Query: 348 VLYVPDFKFNLISIPKICKDLSCSITFTDEECFLQGLSMRPLL-LNNFKHGLYYLEDSAN 172
           VL VP FK +L+S+ ++ KDL+CS+TF    C LQ L+ R  + L   + GLYYL   A+
Sbjct: 383 VLGVPSFKVDLMSVSRVTKDLNCSVTFFPHWCILQDLTTRTTIGLGEQRDGLYYLVALAS 442

Query: 171 KGSDMIQPSVSSVNTTSLHKNKNEVDKVKLWHLRMGHLPPA----MFQHIKN 28
           +      PS ++ +  S   +        LWH R+GHL  +    M +H+ N
Sbjct: 443 EKPKNQTPSAAATSCRS--PSSQVTSSTALWHHRLGHLSSSRLDFMAKHLLN 492


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
 Frame = -2

Query: 348 VLYVPDFKFNLISIPKICKDLSCSITFTDEECFLQGLSMRPLL-LNNFKHGLYYLEDSAN 172
           VL VP FK +L+S+ ++ KDL+CS+TF    C LQ L+ R  + L   + GLYYL   A+
Sbjct: 429 VLGVPSFKVDLMSVSRVTKDLNCSVTFFPHWCILQDLTTRTTIGLGEQRDGLYYLVALAS 488

Query: 171 KGSDMIQPSVSSVNTTSLHKNKNEVDKVKLWHLRMGHLPPA----MFQHIKN 28
           +      PS  + +  S   +        LWH R+GHL  +    M +H+ N
Sbjct: 489 EKPKTQTPSXXATSCRS--PSSQVTSSTALWHXRLGHLSSSRLDFMAKHLLN 538


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