BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026483
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   198   2e-52
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   193   1e-51
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   194   1e-51
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               191   5e-51
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   185   3e-49

>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  198 bits (503), Expect(2) = 2e-52
 Identities = 98/214 (45%), Positives = 131/214 (61%), Gaps = 26/214 (12%)
 Frame = -3

Query: 859  NKSPGPDGLPTEFYLATWSITGNDVTKGILHFFDTLSLPRAINATALALVAKNQHASSLM 680
            NKSPGPDG  +EF+ ATWS+TG D    I  FF    LP+ +NAT LAL+ K   A  + 
Sbjct: 765  NKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMK 824

Query: 679  DYRPITCCNVLYHL--------------------------KRLIGDNILLAQAMCRNYHL 578
            DYRPI+CCNVLY +                          +RL+ +N+LLA  + ++YH 
Sbjct: 825  DYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHK 884

Query: 577  NSGQPRCAIKLDIKKAFDSIQWRFLFSVMQRMGFPSVFISWVRVCTETAMISVKINGSLE 398
             S  PRCA+K+DI KAFDS+QW+FL + ++ + FP  F  W+++C  TA  SV++NG L 
Sbjct: 885  ESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELA 944

Query: 397  GFFRAKSGLRQGDPLSPYLFVIAMEALTACINKA 296
            GFF +  GLRQG  LSPYLFVI M  L+  I++A
Sbjct: 945  GFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEA 978



 Score = 34.7 bits (78), Expect(2) = 2e-52
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -2

Query: 275  YHWKAKDIKLTHLIFADDVLLYSKGEKDSISALL 174
            YH K + I LTHL FADD++++  G + SI  ++
Sbjct: 986  YHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVI 1019


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  193 bits (491), Expect(2) = 1e-51
 Identities = 96/214 (44%), Positives = 131/214 (61%), Gaps = 26/214 (12%)
 Frame = -3

Query: 859  NKSPGPDGLPTEFYLATWSITGNDVTKGILHFFDTLSLPRAINATALALVAKNQHASSLM 680
            +KSPGPDG  +EF+ ATW I G++ T  +  FF    LP+ IN+T LAL+ K   A  + 
Sbjct: 468  DKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMK 527

Query: 679  DYRPITCCNVLYHL--------------------------KRLIGDNILLAQAMCRNYHL 578
            DYRPI+CCNVLY +                           RL+ +N+LLA  + ++YH 
Sbjct: 528  DYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHK 587

Query: 577  NSGQPRCAIKLDIKKAFDSIQWRFLFSVMQRMGFPSVFISWVRVCTETAMISVKINGSLE 398
            ++   RCAIK+DI KAFDS+QW FL +V   +GFP  FI W+ +C  TA  SV++NG L 
Sbjct: 588  DTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELA 647

Query: 397  GFFRAKSGLRQGDPLSPYLFVIAMEALTACINKA 296
            G+F++  GLRQG  LSPYLFVI M+ L+  ++KA
Sbjct: 648  GYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKA 681



 Score = 37.0 bits (84), Expect(2) = 1e-51
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = -2

Query: 281 FKYHWKAKDIKLTHLIFADDVLLYSKGEKDSISALLE 171
           F YH K K + LTHL FADD+++ S G+  SI  +++
Sbjct: 687 FGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIK 723


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  194 bits (494), Expect(2) = 1e-51
 Identities = 99/215 (46%), Positives = 134/215 (62%), Gaps = 26/215 (12%)
 Frame = -3

Query: 862 KNKSPGPDGLPTEFYLATWSITGNDVTKGILHFFDTLSLPRAINATALALVAKNQHASSL 683
           K+KSPGPDG  +EFY A+W I G++V   I  FF    LP+ +N+T LAL+ K + A  +
Sbjct: 188 KDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREI 247

Query: 682 MDYRPITCCNVLY---------HLK-----------------RLIGDNILLAQAMCRNYH 581
            DYRPI+CCNVLY          LK                 RL+ +N+LLA  + ++YH
Sbjct: 248 KDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYH 307

Query: 580 LNSGQPRCAIKLDIKKAFDSIQWRFLFSVMQRMGFPSVFISWVRVCTETAMISVKINGSL 401
            +S   RCA+K+DI KAFDS+QW FL  V+  M FP  FI W+ +C  TA  S+++NG L
Sbjct: 308 KDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGEL 367

Query: 400 EGFFRAKSGLRQGDPLSPYLFVIAMEALTACINKA 296
            G+FR+  GLRQG  LSPYLFVI+M+ L+  ++KA
Sbjct: 368 AGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKA 402



 Score = 35.4 bits (80), Expect(2) = 1e-51
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = -2

Query: 281 FKYHWKAKDIKLTHLIFADDVLLYSKGEKDSISALLE 171
           F YH + K + LTHL FADD+++ + G+  S+  +++
Sbjct: 408 FGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVK 444


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  191 bits (484), Expect(2) = 5e-51
 Identities = 97/215 (45%), Positives = 129/215 (60%), Gaps = 26/215 (12%)
 Frame = -3

Query: 862 KNKSPGPDGLPTEFYLATWSITGNDVTKGILHFFDTLSLPRAINATALALVAKNQHASSL 683
           K+KSPGPDG  +EFY ATW I G + T  +  FF    LP+ IN+  LAL+ K   A  +
Sbjct: 114 KDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEM 173

Query: 682 MDYRPITCCNVLYHL--------------------------KRLIGDNILLAQAMCRNYH 581
            DYRPI+CCNVLY +                           RL+ +N+LLA  + ++YH
Sbjct: 174 RDYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYH 233

Query: 580 LNSGQPRCAIKLDIKKAFDSIQWRFLFSVMQRMGFPSVFISWVRVCTETAMISVKINGSL 401
            +S   RCAIK+DI KAFDS+QW FL + +  M F   FI W+ +C  TA  SV++NG L
Sbjct: 234 KDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDL 293

Query: 400 EGFFRAKSGLRQGDPLSPYLFVIAMEALTACINKA 296
            G+F++K GLRQG  LSPYLFVI M+ L+  ++KA
Sbjct: 294 VGYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKA 328



 Score = 37.4 bits (85), Expect(2) = 5e-51
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = -2

Query: 281 FKYHWKAKDIKLTHLIFADDVLLYSKGEKDSISALLE 171
           F +H K + + LTHL FADD+++ S G+  SI  +LE
Sbjct: 334 FGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILE 370


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  185 bits (469), Expect(2) = 3e-49
 Identities = 93/215 (43%), Positives = 128/215 (59%), Gaps = 26/215 (12%)
 Frame = -3

Query: 859  NKSPGPDGLPTEFYLATWSITGNDVTKGILHFFDTLSLPRAINATALALVAKNQHASSLM 680
            +KSPGPDG   EFY   W+I G +    I  FF    LP+ IN+T LAL+ K + A  + 
Sbjct: 356  DKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMK 415

Query: 679  DYRPITCCNVLYHL--------------------------KRLIGDNILLAQAMCRNYHL 578
            DYRPI+CCNVLY +                           RL+ +N+LLA  + ++YH 
Sbjct: 416  DYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHK 475

Query: 577  NSGQPRCAIKLDIKKAFDSIQWRFLFSVMQRMGFPSVFISWVRVCTETAMISVKINGSLE 398
            +S   RCA+K+DI KAFDS+QW+FL +V++ M FP  F  W+ +C  TA  SV++NG L 
Sbjct: 476  DSVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELA 535

Query: 397  GFFRAKSGLRQGDPLSPYLFVIAMEALTACINKAL 293
            G F +   LRQG  LSPYLFVI+M+ L+  ++KA+
Sbjct: 536  GVFSSARELRQGCSLSPYLFVISMDVLSKMLDKAV 570



 Score = 37.4 bits (85), Expect(2) = 3e-49
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = -2

Query: 281 FKYHWKAKDIKLTHLIFADDVLLYSKGEKDSISALLE 171
           F YH K + I LTHL FADD+++ S G+  SI  +++
Sbjct: 575 FGYHPKCRAIGLTHLSFADDLMILSDGKVRSIDGIVK 611