BLASTX nr result

ID: Angelica23_contig00026480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026480
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14940.3| unnamed protein product [Vitis vinifera]              230   3e-58
ref|XP_002277262.1| PREDICTED: uncharacterized protein LOC100255...   230   3e-58
ref|XP_004160907.1| PREDICTED: 50S ribosomal protein L19, chloro...   220   4e-55
ref|XP_004139446.1| PREDICTED: 50S ribosomal protein L19, chloro...   220   4e-55
gb|AFO66496.1| putative 50S ribosomal protein L19 [Brassica napus]    214   2e-53

>emb|CBI14940.3| unnamed protein product [Vitis vinifera]
          Length = 270

 Score =  230 bits (587), Expect = 3e-58
 Identities = 118/151 (78%), Positives = 132/151 (87%), Gaps = 1/151 (0%)
 Frame = +3

Query: 339 AMKPTIHSRCITTLGNSGSVLKDNPA-PLPDVVPRIKFKRLDKTARNIMQILDKEAVEEV 515
           A  PT  SRCITT  N  S  +D+ A P+ D+ PRIKFKRLDKT+++IMQILDKEAVEEV
Sbjct: 114 AAMPTFPSRCITTTVNPISASQDSSAAPVSDLAPRIKFKRLDKTSKHIMQILDKEAVEEV 173

Query: 516 KARREIPEIKPGYIIQLKVETPENKRRISTLKGIVIARRNAGLNTTIRLRRLITGIGVES 695
           +A+REIPEIKPGYI+QLKVE PENKRR S LKGIVIARRNAGLNTT RLRRL+ G+GVES
Sbjct: 174 RAKREIPEIKPGYIVQLKVEVPENKRRTSVLKGIVIARRNAGLNTTFRLRRLVAGVGVES 233

Query: 696 LFPLYSPNIKEIKVLDKKKVRRAKLYYLRDR 788
           LFPLYSP+IKEIKVLDKKKVRRAKLYYLRD+
Sbjct: 234 LFPLYSPSIKEIKVLDKKKVRRAKLYYLRDK 264


>ref|XP_002277262.1| PREDICTED: uncharacterized protein LOC100255272 [Vitis vinifera]
          Length = 243

 Score =  230 bits (587), Expect = 3e-58
 Identities = 118/151 (78%), Positives = 132/151 (87%), Gaps = 1/151 (0%)
 Frame = +3

Query: 339 AMKPTIHSRCITTLGNSGSVLKDNPA-PLPDVVPRIKFKRLDKTARNIMQILDKEAVEEV 515
           A  PT  SRCITT  N  S  +D+ A P+ D+ PRIKFKRLDKT+++IMQILDKEAVEEV
Sbjct: 87  AAMPTFPSRCITTTVNPISASQDSSAAPVSDLAPRIKFKRLDKTSKHIMQILDKEAVEEV 146

Query: 516 KARREIPEIKPGYIIQLKVETPENKRRISTLKGIVIARRNAGLNTTIRLRRLITGIGVES 695
           +A+REIPEIKPGYI+QLKVE PENKRR S LKGIVIARRNAGLNTT RLRRL+ G+GVES
Sbjct: 147 RAKREIPEIKPGYIVQLKVEVPENKRRTSVLKGIVIARRNAGLNTTFRLRRLVAGVGVES 206

Query: 696 LFPLYSPNIKEIKVLDKKKVRRAKLYYLRDR 788
           LFPLYSP+IKEIKVLDKKKVRRAKLYYLRD+
Sbjct: 207 LFPLYSPSIKEIKVLDKKKVRRAKLYYLRDK 237


>ref|XP_004160907.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 189

 Score =  220 bits (561), Expect = 4e-55
 Identities = 111/143 (77%), Positives = 127/143 (88%)
 Frame = +3

Query: 360 SRCITTLGNSGSVLKDNPAPLPDVVPRIKFKRLDKTARNIMQILDKEAVEEVKARREIPE 539
           SR I T  +  S L+ +PA    + PRIKFKRLDKT+R+IMQILDKEAVEEVKARREIP+
Sbjct: 40  SRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPD 99

Query: 540 IKPGYIIQLKVETPENKRRISTLKGIVIARRNAGLNTTIRLRRLITGIGVESLFPLYSPN 719
           IKPGYI+QLKVE PENKRRISTLKGIVIARRNAGLN+T R+RR++ G+G+ESLFPLYSPN
Sbjct: 100 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 159

Query: 720 IKEIKVLDKKKVRRAKLYYLRDR 788
           IKEIKVL+KKKVRRAKLYYLRD+
Sbjct: 160 IKEIKVLEKKKVRRAKLYYLRDK 182


>ref|XP_004139446.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 269

 Score =  220 bits (561), Expect = 4e-55
 Identities = 111/143 (77%), Positives = 127/143 (88%)
 Frame = +3

Query: 360 SRCITTLGNSGSVLKDNPAPLPDVVPRIKFKRLDKTARNIMQILDKEAVEEVKARREIPE 539
           SR I T  +  S L+ +PA    + PRIKFKRLDKT+R+IMQILDKEAVEEVKARREIP+
Sbjct: 120 SRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPD 179

Query: 540 IKPGYIIQLKVETPENKRRISTLKGIVIARRNAGLNTTIRLRRLITGIGVESLFPLYSPN 719
           IKPGYI+QLKVE PENKRRISTLKGIVIARRNAGLN+T R+RR++ G+G+ESLFPLYSPN
Sbjct: 180 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 239

Query: 720 IKEIKVLDKKKVRRAKLYYLRDR 788
           IKEIKVL+KKKVRRAKLYYLRD+
Sbjct: 240 IKEIKVLEKKKVRRAKLYYLRDK 262


>gb|AFO66496.1| putative 50S ribosomal protein L19 [Brassica napus]
          Length = 260

 Score =  214 bits (546), Expect = 2e-53
 Identities = 106/146 (72%), Positives = 127/146 (86%)
 Frame = +3

Query: 351 TIHSRCITTLGNSGSVLKDNPAPLPDVVPRIKFKRLDKTARNIMQILDKEAVEEVKARRE 530
           T  SRC +T+G+S        AP  D+VPRIKFKRLDKTA++IMQI+DKEAVEEV+  RE
Sbjct: 110 TYASRCFSTVGDSVQSTPQGSAP--DMVPRIKFKRLDKTAKHIMQIVDKEAVEEVRNGRE 167

Query: 531 IPEIKPGYIIQLKVETPENKRRISTLKGIVIARRNAGLNTTIRLRRLITGIGVESLFPLY 710
           IPEI+PGYI+QLKVE PENKRR+S +KGIVIARRNAGLN+T R+RRL+ G+GVES+FPLY
Sbjct: 168 IPEIRPGYIVQLKVEVPENKRRVSIVKGIVIARRNAGLNSTFRIRRLVAGVGVESMFPLY 227

Query: 711 SPNIKEIKVLDKKKVRRAKLYYLRDR 788
           SPN++EIKVLDKK+VRRAKLYYLRD+
Sbjct: 228 SPNLREIKVLDKKRVRRAKLYYLRDK 253


Top