BLASTX nr result

ID: Angelica23_contig00026454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026454
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266482.1| PREDICTED: general transcription factor IIH ...    96   3e-18
ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17
ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group] g...    90   2e-16
gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indi...    90   2e-16
dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare]     88   6e-16

>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
           vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
           product [Vitis vinifera]
          Length = 70

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +3

Query: 3   CDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKISEFREQNTYEKPA 179
           CDIPMAQFIINMNA++P SQKFI+HVLD THLFV+  +A  IR  ISEFREQN+YEKPA
Sbjct: 12  CDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEFREQNSYEKPA 70


>ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|222871123|gb|EEF08254.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 40/59 (67%), Positives = 51/59 (86%)
 Frame = +3

Query: 3   CDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKISEFREQNTYEKPA 179
           CDIPMAQFIIN+NA+LP SQKFI+H+LD TH+FV+  ++  IR  IS+FREQN+YEKP+
Sbjct: 12  CDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDFREQNSYEKPS 70


>ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group]
           gi|34393555|dbj|BAC83153.1| unknown protein [Oryza
           sativa Japonica Group] gi|113611604|dbj|BAF21982.1|
           Os07g0573600 [Oryza sativa Japonica Group]
           gi|215707252|dbj|BAG93712.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218199880|gb|EEC82307.1| hypothetical protein
           OsI_26568 [Oryza sativa Indica Group]
           gi|222637319|gb|EEE67451.1| hypothetical protein
           OsJ_24828 [Oryza sativa Japonica Group]
          Length = 131

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 39/58 (67%), Positives = 50/58 (86%)
 Frame = +3

Query: 3   CDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKISEFREQNTYEKP 176
           CD+PMAQFI+N+NA++P S KFILH+LD TH+FV+  +A  IR KISEFR+QN+YEKP
Sbjct: 73  CDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRSKISEFRDQNSYEKP 130


>gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indica Group]
           gi|222630525|gb|EEE62657.1| hypothetical protein
           OsJ_17460 [Oryza sativa Japonica Group]
          Length = 81

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/58 (67%), Positives = 50/58 (86%)
 Frame = +3

Query: 3   CDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKISEFREQNTYEKP 176
           CD+PMAQFI+N+NA++P S KFILH+LD TH+FV+  +A  IR KISEFR+QN+YEKP
Sbjct: 23  CDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRGKISEFRDQNSYEKP 80


>dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 71

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 36/58 (62%), Positives = 50/58 (86%)
 Frame = +3

Query: 3   CDIPMAQFIINMNAALPQSQKFILHVLDDTHLFVRSDMAGSIRDKISEFREQNTYEKP 176
           CDIPMAQFI+NMNA++P S KFI+H+LD TH+F++ +M   I+ K++EFR+QN+YEKP
Sbjct: 13  CDIPMAQFIVNMNASMPASDKFIVHILDPTHMFIQPNMGDYIKSKMAEFRDQNSYEKP 70


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