BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026416
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]         194   6e-48
gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Grou...   194   6e-48
gb|AEJ07943.1| Ji4 putative pol protein [Zea diploperennis]           194   6e-48
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  192   2e-47
gb|AAL75483.1|AF466202_9 putative pol protein [Zea mays]              192   2e-47

>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
          Length = 1760

 Score =  194 bits (493), Expect = 6e-48
 Identities = 89/142 (62%), Positives = 113/142 (79%)
 Frame = +3

Query: 3    CKIDRKSTSGSCQFLGGRLVSWFNKKQKSISTSTAEAEYIAAGSCCAQIMWMRNQLMDYG 182
            CKI+RKSTSG+CQFLG  LVSW +KKQ S++ STAEAEYIAAG CCAQ++WMR  L DYG
Sbjct: 1613 CKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLRDYG 1672

Query: 183  LSYSKIPIYCDNQSAIAMTGNPVQHSLTKHISIRYHFIREQVLEGTIELHFVPTEQQLAD 362
               +K+P+ CDN+SAI M  NPV+HS TKHI+IRYHF+R+   +G IE+ ++ T+ QLAD
Sbjct: 1673 YKLTKVPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLAD 1732

Query: 363  IFTKPLPEATFVKLVNELGMVN 428
            IFTKPL E TF KL +EL +++
Sbjct: 1733 IFTKPLDEQTFTKLRHELNILD 1754


>gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Group]
            gi|31431391|gb|AAP53179.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1299

 Score =  194 bits (493), Expect = 6e-48
 Identities = 87/145 (60%), Positives = 114/145 (78%)
 Frame = +3

Query: 3    CKIDRKSTSGSCQFLGGRLVSWFNKKQKSISTSTAEAEYIAAGSCCAQIMWMRNQLMDYG 182
            CK+DRKSTSGSCQ LG  LVSW +KKQ S++ STAEAEY++AGSCCAQ++WM+  L+DYG
Sbjct: 1153 CKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQILLDYG 1212

Query: 183  LSYSKIPIYCDNQSAIAMTGNPVQHSLTKHISIRYHFIREQVLEGTIELHFVPTEQQLAD 362
            +S++K P+ CDN SAI +  NPVQHS TKHI IR+HF+R+ V++  I +  + TE QLAD
Sbjct: 1213 ISFTKTPLLCDNDSAIKIANNPVQHSRTKHIDIRHHFLRDHVVKSDIVISHIRTEDQLAD 1272

Query: 363  IFTKPLPEATFVKLVNELGMVNYES 437
            IFTKPL E  F KL NEL ++++ +
Sbjct: 1273 IFTKPLDETRFCKLRNELNVIDFSN 1297


>gb|AEJ07943.1| Ji4 putative pol protein [Zea diploperennis]
          Length = 1063

 Score =  194 bits (493), Expect = 6e-48
 Identities = 89/142 (62%), Positives = 113/142 (79%)
 Frame = +3

Query: 3    CKIDRKSTSGSCQFLGGRLVSWFNKKQKSISTSTAEAEYIAAGSCCAQIMWMRNQLMDYG 182
            CKI+RKSTSG+CQFLG  LVSW +KKQ S++ STAEAEYIAAG CCAQ++WMR  L DYG
Sbjct: 916  CKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLRDYG 975

Query: 183  LSYSKIPIYCDNQSAIAMTGNPVQHSLTKHISIRYHFIREQVLEGTIELHFVPTEQQLAD 362
               +K+P+ CDN+SAI M  NPV+HS TKHI+IRYHF+R+   +G IE+ ++ T+ QLAD
Sbjct: 976  YKLTKVPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLAD 1035

Query: 363  IFTKPLPEATFVKLVNELGMVN 428
            IFTKPL E TF KL +EL +++
Sbjct: 1036 IFTKPLDEQTFTKLRHELNILD 1057


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  192 bits (489), Expect = 2e-47
 Identities = 87/142 (61%), Positives = 114/142 (80%)
 Frame = +3

Query: 3    CKIDRKSTSGSCQFLGGRLVSWFNKKQKSISTSTAEAEYIAAGSCCAQIMWMRNQLMDYG 182
            CKI+RKSTSG+CQFLG  LVSW +KKQ S++ STAEAEYIAAG CCAQ++WMR  L+DYG
Sbjct: 916  CKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLLDYG 975

Query: 183  LSYSKIPIYCDNQSAIAMTGNPVQHSLTKHISIRYHFIREQVLEGTIELHFVPTEQQLAD 362
               +K+P+ CDN+SAI M  NPV+HS TKHI+IRYHF+R+   +G IE+ ++ T+ QLAD
Sbjct: 976  YKLTKVPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLAD 1035

Query: 363  IFTKPLPEATFVKLVNELGMVN 428
            IFTKPL E +F +L +EL +++
Sbjct: 1036 IFTKPLDEQSFTRLRHELNILD 1057


>gb|AAL75483.1|AF466202_9 putative pol protein [Zea mays]
          Length = 1553

 Score =  192 bits (488), Expect = 2e-47
 Identities = 86/142 (60%), Positives = 114/142 (80%)
 Frame = +3

Query: 3    CKIDRKSTSGSCQFLGGRLVSWFNKKQKSISTSTAEAEYIAAGSCCAQIMWMRNQLMDYG 182
            CK+DRKSTSG+CQFLG  LVSW +KKQ S++ STAEAEY+AAG CCAQ++WMR  L D+G
Sbjct: 1407 CKVDRKSTSGTCQFLGRSLVSWSSKKQTSVALSTAEAEYVAAGQCCAQLLWMRQTLRDFG 1466

Query: 183  LSYSKIPIYCDNQSAIAMTGNPVQHSLTKHISIRYHFIREQVLEGTIELHFVPTEQQLAD 362
             + +K+P+ CDN+SAI M  NPV+HS TKHI IR+HF+R+   +G IE+ +V TE QLAD
Sbjct: 1467 YNLNKVPLLCDNESAIRMADNPVEHSRTKHIDIRHHFLRDHQQKGDIEVFYVSTENQLAD 1526

Query: 363  IFTKPLPEATFVKLVNELGMVN 428
            IFTKPL E+TF +L +E+ +++
Sbjct: 1527 IFTKPLDESTFCRLRSEINVLD 1548