BLASTX nr result
ID: Angelica23_contig00026415
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00026415
(680 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|2... 144 1e-39
ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 131 3e-39
ref|XP_002519063.1| pentatricopeptide repeat-containing protein,... 145 6e-39
ref|XP_002305798.1| predicted protein [Populus trichocarpa] gi|2... 139 1e-37
ref|XP_002879469.1| pentatricopeptide repeat-containing protein ... 137 1e-36
>ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|222870841|gb|EEF07972.1|
predicted protein [Populus trichocarpa]
Length = 585
Score = 144 bits (363), Expect(2) = 1e-39
Identities = 71/121 (58%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
Frame = -3
Query: 456 GSIKHTHQLFLSISNPDSFLYSTLINSTTKFH-FPLYSTYFYHRIISSCVWPSSYAFTAV 280
GSI +T Q+FL++ NPDSFL+++LI ST+K H F +YS YFY R++ S V PS+Y FT+V
Sbjct: 58 GSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSV 117
Query: 279 IKACVELSALGFGIVVYCHVLAFGYGLNVFVQASLVSFYAKCGELGVSRKVFDKMPERSV 100
IK+C +LSAL G VV+ HVL G+GL+V+VQA+LV+ Y KCG+L +RKVFDK+ ERS+
Sbjct: 118 IKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSI 177
Query: 99 V 97
V
Sbjct: 178 V 178
Score = 45.1 bits (105), Expect(2) = 1e-39
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = -1
Query: 104 VWLFCRMRDLGVEFDSTTFVSVLSACSQLGAIDL 3
+ LF RM++ GVE DS TFVSVLSAC+ LGA L
Sbjct: 197 IGLFDRMKETGVEPDSATFVSVLSACAHLGAFSL 230
Score = 65.9 bits (159), Expect(2) = 6e-12
Identities = 35/120 (29%), Positives = 63/120 (52%)
Frame = -3
Query: 456 GSIKHTHQLFLSISNPDSFLYSTLINSTTKFHFPLYSTYFYHRIISSCVWPSSYAFTAVI 277
G + + ++F I ++++I+ + F + + R+ + V P S F +V+
Sbjct: 160 GDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVL 219
Query: 276 KACVELSALGFGIVVYCHVLAFGYGLNVFVQASLVSFYAKCGELGVSRKVFDKMPERSVV 97
AC L A G V+ +++ G LNV + SL++ Y +CG + +R+VFD M ER+VV
Sbjct: 220 SACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVV 279
Score = 30.4 bits (67), Expect(2) = 6e-12
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 104 VWLFCRMRDLGVEFDSTTFVSVLSACSQLGAID 6
V LF MR G+ +S TFV+VLSAC+ G ++
Sbjct: 298 VELFHEMRRNGLFPNSITFVAVLSACAHAGLVN 330
>ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33760-like [Vitis vinifera]
Length = 561
Score = 131 bits (330), Expect(2) = 3e-39
Identities = 60/120 (50%), Positives = 90/120 (75%)
Frame = -3
Query: 456 GSIKHTHQLFLSISNPDSFLYSTLINSTTKFHFPLYSTYFYHRIISSCVWPSSYAFTAVI 277
GSI +T QLF SI+NPDSFL++ +I +++KF F + FY R+++ + S+Y FTAVI
Sbjct: 65 GSILYTRQLFFSITNPDSFLFNAIIKASSKFGFSCDAILFYRRMVADSIPQSNYTFTAVI 124
Query: 276 KACVELSALGFGIVVYCHVLAFGYGLNVFVQASLVSFYAKCGELGVSRKVFDKMPERSVV 97
KAC ++SAL G ++ HVL GY + FVQA+L++FYAK G++G ++KVFD+MPER+++
Sbjct: 125 KACADISALRIGRPIHSHVLVCGYDSDSFVQAALIAFYAKSGDVGEAKKVFDRMPERTII 184
Score = 56.6 bits (135), Expect(2) = 3e-39
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -1
Query: 104 VWLFCRMRDLGVEFDSTTFVSVLSACSQLGAIDL 3
V LF RMR+LGVEFDS TFVSVLSACSQ GA+DL
Sbjct: 203 VGLFYRMRELGVEFDSATFVSVLSACSQSGALDL 236
Score = 57.4 bits (137), Expect = 3e-06
Identities = 31/120 (25%), Positives = 63/120 (52%)
Frame = -3
Query: 456 GSIKHTHQLFLSISNPDSFLYSTLINSTTKFHFPLYSTYFYHRIISSCVWPSSYAFTAVI 277
G + ++F + ++++I+ + F + ++R+ V S F +V+
Sbjct: 166 GDVGEAKKVFDRMPERTIIAWNSMISGYDQNGFSKEAVGLFYRMRELGVEFDSATFVSVL 225
Query: 276 KACVELSALGFGIVVYCHVLAFGYGLNVFVQASLVSFYAKCGELGVSRKVFDKMPERSVV 97
AC + AL G V+ +++ + +NV + SL++ Y +CG + +R+VFD+M ER+VV
Sbjct: 226 SACSQSGALDLGCWVHDYIVNNSFDVNVVLGTSLINMYTRCGNVSKAREVFDEMNERNVV 285
>ref|XP_002519063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541726|gb|EEF43274.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 386
Score = 145 bits (366), Expect(2) = 6e-39
Identities = 71/121 (58%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
Frame = -3
Query: 456 GSIKHTHQLFLSISNPDSFLYSTLINSTTKFH-FPLYSTYFYHRIISSCVWPSSYAFTAV 280
GSI +T Q+FLS++NPDSFL++TLI ST+KFH F +YS +FY+ ++ S + PS+Y FT++
Sbjct: 58 GSIIYTRQIFLSVANPDSFLFNTLIKSTSKFHKFSIYSLFFYNCMLLSDISPSAYTFTSI 117
Query: 279 IKACVELSALGFGIVVYCHVLAFGYGLNVFVQASLVSFYAKCGELGVSRKVFDKMPERSV 100
+K+C +LS+L G VV+ HVL G+GL+V+VQA+LV+ YAK G+LG +RKVFDKM ERSV
Sbjct: 118 VKSCADLSSLKLGKVVHGHVLVNGFGLDVYVQAALVACYAKSGDLGNARKVFDKMRERSV 177
Query: 99 V 97
V
Sbjct: 178 V 178
Score = 41.6 bits (96), Expect(2) = 6e-39
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = -1
Query: 98 LFCRMRDLGVEFDSTTFVSVLSACSQLGAIDL 3
LF +MR+ G E DS TFV VLSAC+QLGA+ +
Sbjct: 199 LFKKMREEGFEPDSATFVIVLSACAQLGALSM 230
Score = 61.2 bits (147), Expect(2) = 5e-10
Identities = 32/120 (26%), Positives = 61/120 (50%)
Frame = -3
Query: 456 GSIKHTHQLFLSISNPDSFLYSTLINSTTKFHFPLYSTYFYHRIISSCVWPSSYAFTAVI 277
G + + ++F + ++++I+ + F + + ++ P S F V+
Sbjct: 160 GDLGNARKVFDKMRERSVVSWNSIISGYEQNGFGREAIRLFKKMREEGFEPDSATFVIVL 219
Query: 276 KACVELSALGFGIVVYCHVLAFGYGLNVFVQASLVSFYAKCGELGVSRKVFDKMPERSVV 97
AC +L AL G V+ + + G LNV + SL++ Y +CG + +R+VFD M E++VV
Sbjct: 220 SACAQLGALSMGCWVHKYTIGHGLDLNVVLGTSLINMYTRCGTVTKAREVFDSMKEKNVV 279
Score = 28.5 bits (62), Expect(2) = 5e-10
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 104 VWLFCRMRDLGVEFDSTTFVSVLSACSQLGAI 9
V LF M+ G +S TFV+VLSAC+ G +
Sbjct: 298 VQLFDEMKRRGPCPNSVTFVAVLSACAHAGLV 329
>ref|XP_002305798.1| predicted protein [Populus trichocarpa] gi|222848762|gb|EEE86309.1|
predicted protein [Populus trichocarpa]
Length = 584
Score = 139 bits (351), Expect(2) = 1e-37
Identities = 69/121 (57%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Frame = -3
Query: 456 GSIKHTHQLFLSISNPDSFLYSTLINSTTKFH-FPLYSTYFYHRIISSCVWPSSYAFTAV 280
GSI +T Q+FL + NPDSFL+++LI ST+KFH F +YS YFY R++ S V PS+Y FT+V
Sbjct: 58 GSISYTRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSV 117
Query: 279 IKACVELSALGFGIVVYCHVLAFGYGLNVFVQASLVSFYAKCGELGVSRKVFDKMPERSV 100
IK+C +L AL G +++ HVL G+G +V+VQ +L+SFY KCG L +RKVFDKM +RSV
Sbjct: 118 IKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSV 177
Query: 99 V 97
V
Sbjct: 178 V 178
Score = 42.7 bits (99), Expect(2) = 1e-37
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = -1
Query: 98 LFCRMRDLGVEFDSTTFVSVLSACSQLGAIDL 3
LF RM+++GVE +S TFVSVLSAC+ LGA L
Sbjct: 199 LFDRMKEIGVEPNSATFVSVLSACAHLGAFIL 230
Score = 61.6 bits (148), Expect(2) = 1e-10
Identities = 34/120 (28%), Positives = 63/120 (52%)
Frame = -3
Query: 456 GSIKHTHQLFLSISNPDSFLYSTLINSTTKFHFPLYSTYFYHRIISSCVWPSSYAFTAVI 277
G + + ++F + + ++++I+ + F + + R+ V P+S F +V+
Sbjct: 160 GVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVL 219
Query: 276 KACVELSALGFGIVVYCHVLAFGYGLNVFVQASLVSFYAKCGELGVSRKVFDKMPERSVV 97
AC L A G V+ + + G LNV + SL++ Y +CG + +R+VFD M ER+VV
Sbjct: 220 SACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVV 279
Score = 30.4 bits (67), Expect(2) = 1e-10
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 104 VWLFCRMRDLGVEFDSTTFVSVLSACSQLGAID 6
V LF MR G+ +S TFV+VLSAC+ G ++
Sbjct: 298 VELFHEMRRNGLLPNSITFVAVLSACAHAGLVN 330
>ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325308|gb|EFH55728.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 583
Score = 137 bits (346), Expect(2) = 1e-36
Identities = 62/119 (52%), Positives = 92/119 (77%)
Frame = -3
Query: 453 SIKHTHQLFLSISNPDSFLYSTLINSTTKFHFPLYSTYFYHRIISSCVWPSSYAFTAVIK 274
+I +TH LFLS+ PD FL++++I ST+K PL+ +Y R++SS V PS+Y FT+VIK
Sbjct: 56 AIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIK 115
Query: 273 ACVELSALGFGIVVYCHVLAFGYGLNVFVQASLVSFYAKCGELGVSRKVFDKMPERSVV 97
+C +LSAL G V+CH + G+GL+ +VQA+LV+FY+KCG++ +R+VFD+MPE+SVV
Sbjct: 116 SCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVV 174
Score = 41.6 bits (96), Expect(2) = 1e-36
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = -1
Query: 98 LFCRMRDLGVEFDSTTFVSVLSACSQLGAIDL 3
+F +MR+ G E DS TFVS+LSAC+Q GAI L
Sbjct: 195 VFYQMRESGFEPDSATFVSLLSACAQTGAISL 226
Score = 60.1 bits (144), Expect(2) = 4e-09
Identities = 29/119 (24%), Positives = 66/119 (55%)
Frame = -3
Query: 456 GSIKHTHQLFLSISNPDSFLYSTLINSTTKFHFPLYSTYFYHRIISSCVWPSSYAFTAVI 277
G ++ Q+F + +++L++ + + ++++ S P S F +++
Sbjct: 156 GDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSLL 215
Query: 276 KACVELSALGFGIVVYCHVLAFGYGLNVFVQASLVSFYAKCGELGVSRKVFDKMPERSV 100
AC + A+ G V+ ++++ G +NV + +L++ Y++CG++G +R+VFDKM E +V
Sbjct: 216 SACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Score = 26.6 bits (57), Expect(2) = 4e-09
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 98 LFCRMRD-LGVEFDSTTFVSVLSACSQLGAID 6
LF +M D G ++ TFV+VLSAC+ G ++
Sbjct: 296 LFNKMEDDCGSIPNNVTFVAVLSACAHAGLVE 327