BLASTX nr result

ID: Angelica23_contig00026395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026395
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   200   1e-49
ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   198   4e-49
gb|ACU23482.1| unknown [Glycine max]                                  198   4e-49
ref|XP_002307595.1| f-box family protein [Populus trichocarpa] g...   196   1e-48
ref|XP_003518912.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   196   2e-48

>ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Vitis
           vinifera] gi|359479635|ref|XP_003632310.1| PREDICTED:
           F-box/kelch-repeat protein SKIP30-like isoform 2 [Vitis
           vinifera] gi|359479637|ref|XP_003632311.1| PREDICTED:
           F-box/kelch-repeat protein SKIP30-like isoform 3 [Vitis
           vinifera]
          Length = 345

 Score =  200 bits (508), Expect = 1e-49
 Identities = 90/149 (60%), Positives = 118/149 (79%), Gaps = 1/149 (0%)
 Frame = -1

Query: 445 TEDFICVCAREPDNIWQLYDPRENLWITTPTLPSHIRHISYFSAVSVAGKLFVLGGGHNP 266
           +ED +CVCA +P+N+WQLYDPR++LWI+ P LPS IRH+++F AVS AGKLFVLGGG + 
Sbjct: 54  SEDLLCVCAFDPENLWQLYDPRKDLWISLPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDA 113

Query: 265 ETLEDGDE-GVFATNEVWSYEPVTRKWALCAPMIVPRILFACGVVNGKIIVAGGFDASRS 89
                GD+ G FATNEVWSY+P+ R+WA  APM+VPR +FAC V++GKI+VAGGF + R 
Sbjct: 114 VDPLTGDQDGSFATNEVWSYDPIIRQWAPRAPMLVPRAMFACCVLDGKIVVAGGFTSCRK 173

Query: 88  PTAKAEIYDPENNDWILIPDLNHTNNSLC 2
             ++AEIYDPE + W+ IPDL+ T+NS C
Sbjct: 174 SISQAEIYDPEKDAWVSIPDLHRTHNSAC 202


>ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1
           [Glycine max] gi|356536141|ref|XP_003536598.1|
           PREDICTED: F-box/kelch-repeat protein SKIP30-like
           isoform 2 [Glycine max] gi|356536143|ref|XP_003536599.1|
           PREDICTED: F-box/kelch-repeat protein SKIP30-like
           isoform 3 [Glycine max]
          Length = 344

 Score =  198 bits (503), Expect = 4e-49
 Identities = 91/149 (61%), Positives = 116/149 (77%), Gaps = 1/149 (0%)
 Frame = -1

Query: 445 TEDFICVCAREPDNIWQLYDPRENLWITTPTLPSHIRHISYFSAVSVAGKLFVLGGGHNP 266
           +ED +CVCA EP+N+WQLYDP+ +LWIT P LPS IRH+S+F AVS AGKLFV+GGG + 
Sbjct: 54  SEDLLCVCAFEPENLWQLYDPQRDLWITLPVLPSRIRHLSHFGAVSTAGKLFVIGGGSDA 113

Query: 265 ETLEDGDE-GVFATNEVWSYEPVTRKWALCAPMIVPRILFACGVVNGKIIVAGGFDASRS 89
                GD+ G FATNEVWSY+PV R+W+  A M+VPR +FAC V+NGKI+VAGGF + R 
Sbjct: 114 VDPLTGDQDGCFATNEVWSYDPVVRQWSPRAAMLVPRSMFACCVMNGKIVVAGGFTSCRK 173

Query: 88  PTAKAEIYDPENNDWILIPDLNHTNNSLC 2
             ++AEIYDPE + WI +PDL+ T+NS C
Sbjct: 174 SISQAEIYDPEKDVWIPMPDLHRTHNSAC 202


>gb|ACU23482.1| unknown [Glycine max]
          Length = 344

 Score =  198 bits (503), Expect = 4e-49
 Identities = 91/149 (61%), Positives = 116/149 (77%), Gaps = 1/149 (0%)
 Frame = -1

Query: 445 TEDFICVCAREPDNIWQLYDPRENLWITTPTLPSHIRHISYFSAVSVAGKLFVLGGGHNP 266
           +ED +CVCA EP+N+WQLYDP+ +LWIT P LPS IRH+S+F AVS AGKLFV+GGG + 
Sbjct: 54  SEDLLCVCAFEPENLWQLYDPQRDLWITLPVLPSRIRHLSHFGAVSTAGKLFVIGGGSDA 113

Query: 265 ETLEDGDE-GVFATNEVWSYEPVTRKWALCAPMIVPRILFACGVVNGKIIVAGGFDASRS 89
                GD+ G FATNEVWSY+PV R+W+  A M+VPR +FAC V+NGKI+VAGGF + R 
Sbjct: 114 VDPLTGDQDGCFATNEVWSYDPVVRQWSPRAAMLVPRSMFACCVMNGKIVVAGGFTSCRK 173

Query: 88  PTAKAEIYDPENNDWILIPDLNHTNNSLC 2
             ++AEIYDPE + WI +PDL+ T+NS C
Sbjct: 174 SISQAEIYDPEKDVWIPMPDLHRTHNSAC 202


>ref|XP_002307595.1| f-box family protein [Populus trichocarpa]
           gi|118482816|gb|ABK93324.1| unknown [Populus
           trichocarpa] gi|222857044|gb|EEE94591.1| f-box family
           protein [Populus trichocarpa]
          Length = 345

 Score =  196 bits (499), Expect = 1e-48
 Identities = 90/148 (60%), Positives = 113/148 (76%), Gaps = 1/148 (0%)
 Frame = -1

Query: 442 EDFICVCAREPDNIWQLYDPRENLWITTPTLPSHIRHISYFSAVSVAGKLFVLGGGHNPE 263
           ED +CVCA +P+N+WQLYDP  +LWIT P LPS IRH+++F  VS AGKLFVLGGG +  
Sbjct: 55  EDLLCVCAFDPENLWQLYDPHRDLWITLPVLPSKIRHLAHFGVVSSAGKLFVLGGGSDAV 114

Query: 262 TLEDGDE-GVFATNEVWSYEPVTRKWALCAPMIVPRILFACGVVNGKIIVAGGFDASRSP 86
               GD+ G FATNEVWSY+PV R+WA  A M+VPR +FACG +NGKI+VAGGF + R  
Sbjct: 115 DPLTGDQDGSFATNEVWSYDPVLRQWAARASMLVPRAMFACGTLNGKIVVAGGFTSCRKS 174

Query: 85  TAKAEIYDPENNDWILIPDLNHTNNSLC 2
            ++AE+YDPE + WI IPDL+ T+NS C
Sbjct: 175 ISQAEMYDPEKDVWIPIPDLHRTHNSTC 202


>ref|XP_003518912.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like [Glycine max]
          Length = 344

 Score =  196 bits (497), Expect = 2e-48
 Identities = 90/149 (60%), Positives = 115/149 (77%), Gaps = 1/149 (0%)
 Frame = -1

Query: 445 TEDFICVCAREPDNIWQLYDPRENLWITTPTLPSHIRHISYFSAVSVAGKLFVLGGGHNP 266
           +ED +CVCA EP+N+WQLYDP  +LWIT P LPS IRH+S+F AVS AGKLFV+GGG + 
Sbjct: 54  SEDLLCVCAFEPENLWQLYDPLRDLWITLPVLPSRIRHLSHFGAVSTAGKLFVIGGGSDA 113

Query: 265 ETLEDGDE-GVFATNEVWSYEPVTRKWALCAPMIVPRILFACGVVNGKIIVAGGFDASRS 89
                GD+ G FATNEVWSY+PV R+W+  A M+VPR +FAC V+NGKI+VAGGF + R 
Sbjct: 114 VDPLTGDQDGCFATNEVWSYDPVVRQWSPRAAMLVPRSMFACCVMNGKIVVAGGFTSCRK 173

Query: 88  PTAKAEIYDPENNDWILIPDLNHTNNSLC 2
             ++AE+YDPE + WI +PDL+ T+NS C
Sbjct: 174 SISQAEMYDPEKDVWIPMPDLHRTHNSAC 202


Top