BLASTX nr result

ID: Angelica23_contig00026253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026253
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44
ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
ref|XP_002328140.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
ref|XP_002875235.1| pentatricopeptide repeat-containing protein ...   164   7e-39
gb|AAO41891.1| putative selenium-binding protein [Arabidopsis th...   161   5e-38

>ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  180 bits (457), Expect = 9e-44
 Identities = 79/106 (74%), Positives = 97/106 (91%)
 Frame = +2

Query: 2   SGIRPNYATILGVLFACSHAGLVDKGLYYFNSMQKLFGIEPGREHYGCVIDLLGRAGKLD 181
           SG RPNY T+LGVLFACSHAGLV+KG YYF SM+KLFG++PGREHYGC+IDLLGRAG+LD
Sbjct: 346 SGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLD 405

Query: 182 EAIKMIHGMKSEPDAVTWRALLGSCRVHQNIDHAVYAAKQILALDP 319
           EA+K+IH M+ EPD+VTWR LLG+CRVH+N+D A+YAAK+I+ L+P
Sbjct: 406 EAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEP 451


>ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
           gi|449475689|ref|XP_004154524.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  176 bits (446), Expect = 2e-42
 Identities = 80/105 (76%), Positives = 93/105 (88%)
 Frame = +2

Query: 5   GIRPNYATILGVLFACSHAGLVDKGLYYFNSMQKLFGIEPGREHYGCVIDLLGRAGKLDE 184
           G +PNY TILGVLFACSHAGLV+ G YYF SM++ FGI+PGREHYGC+IDLLGRAGKLDE
Sbjct: 310 GPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDE 369

Query: 185 AIKMIHGMKSEPDAVTWRALLGSCRVHQNIDHAVYAAKQILALDP 319
           A+K+IH M  EPDAVTWR LLG+CRVH+N+D A+YAAK+IL LDP
Sbjct: 370 AVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDP 414


>ref|XP_002328140.1| predicted protein [Populus trichocarpa] gi|222837655|gb|EEE76020.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  174 bits (442), Expect = 5e-42
 Identities = 78/105 (74%), Positives = 97/105 (92%)
 Frame = +2

Query: 5   GIRPNYATILGVLFACSHAGLVDKGLYYFNSMQKLFGIEPGREHYGCVIDLLGRAGKLDE 184
           GI+PNY TI+GVLFACSHAGLV++GLYYF+SM++LFGI+PGREHYGC+IDLLGRAG+L E
Sbjct: 258 GIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSE 317

Query: 185 AIKMIHGMKSEPDAVTWRALLGSCRVHQNIDHAVYAAKQILALDP 319
           A+ +I+ M+ EPDAVTWRALL +CRVH+N+D A++AAKQIL LDP
Sbjct: 318 AVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDP 362


>ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321073|gb|EFH51494.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 579

 Score =  164 bits (415), Expect = 7e-39
 Identities = 73/106 (68%), Positives = 93/106 (87%)
 Frame = +2

Query: 2   SGIRPNYATILGVLFACSHAGLVDKGLYYFNSMQKLFGIEPGREHYGCVIDLLGRAGKLD 181
           SG +PNY TI+GVLFACSHAGL++ G YYF SM+KL+GI PGREHYGC+IDLLG+AGKLD
Sbjct: 305 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLD 364

Query: 182 EAIKMIHGMKSEPDAVTWRALLGSCRVHQNIDHAVYAAKQILALDP 319
           +A+K+++ M+ EPDAVTWR LLG+CRV +N+  A YAAK+++ALDP
Sbjct: 365 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 410


>gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  161 bits (408), Expect = 5e-38
 Identities = 72/106 (67%), Positives = 93/106 (87%)
 Frame = +2

Query: 2   SGIRPNYATILGVLFACSHAGLVDKGLYYFNSMQKLFGIEPGREHYGCVIDLLGRAGKLD 181
           SG +PNY TI+GVLFACSHAGL++ G YYF SM+KL+GI+P REHYGC+IDLLG+AGKLD
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412

Query: 182 EAIKMIHGMKSEPDAVTWRALLGSCRVHQNIDHAVYAAKQILALDP 319
           +A+K+++ M+ EPDAVTWR LLG+CRV +N+  A YAAK+++ALDP
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458


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