BLASTX nr result

ID: Angelica23_contig00026171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026171
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529478.1| protein with unknown function [Ricinus commu...   154   7e-36
gb|ACB87912.1| F-box-containing protein 2 [Malus x domestica]         153   2e-35
ref|XP_002309790.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|NP_563759.1| F-box protein SKIP16 [Arabidopsis thaliana] gi|...   144   6e-33
emb|CBI36722.3| unnamed protein product [Vitis vinifera]              144   7e-33

>ref|XP_002529478.1| protein with unknown function [Ricinus communis]
           gi|223531036|gb|EEF32888.1| protein with unknown
           function [Ricinus communis]
          Length = 446

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/112 (63%), Positives = 87/112 (77%)
 Frame = -3

Query: 336 MGIESLGGLAIHKILSKLGPKDTAIVGCVNHGFQDWASDESLWSLFCAQDLHLSLPHDPF 157
           MG+E++G LA+++ILS LGP++TAIV CV+   +  AS+ESLWS FC QDLHLS P DP 
Sbjct: 1   MGLEAVGDLALNEILSILGPEETAIVACVSKRLKASASEESLWSKFCFQDLHLSSPLDPH 60

Query: 156 GNVAPSFKAAYQSWRESFGMYSWPLVLRVKTCWDRIRSWLLVNFPEALTTLR 1
           GN  PSFK AY SWRE+F MY WPLV RVK CWDR+++WL  NFPEA  TL+
Sbjct: 61  GNPLPSFKFAYGSWREAFAMYPWPLVKRVKRCWDRLKNWLTTNFPEAAATLQ 112


>gb|ACB87912.1| F-box-containing protein 2 [Malus x domestica]
          Length = 443

 Score =  153 bits (386), Expect = 2e-35
 Identities = 70/112 (62%), Positives = 88/112 (78%)
 Frame = -3

Query: 336 MGIESLGGLAIHKILSKLGPKDTAIVGCVNHGFQDWASDESLWSLFCAQDLHLSLPHDPF 157
           M +E++G LA+H ILSKLG +D+A   CV+   +  ASDESLWSLFCA+DLHLS P DP 
Sbjct: 1   MNLEAVGDLALHIILSKLGAEDSAKAACVSTKLRASASDESLWSLFCARDLHLSQPLDPL 60

Query: 156 GNVAPSFKAAYQSWRESFGMYSWPLVLRVKTCWDRIRSWLLVNFPEALTTLR 1
           GN+APSFK +YQ WR +F MY W LV RVK CWD+IR+WL +NFPEA++TL+
Sbjct: 61  GNLAPSFKESYQLWRVTFKMYPWSLVKRVKRCWDKIRNWLTINFPEAVSTLK 112


>ref|XP_002309790.1| predicted protein [Populus trichocarpa] gi|222852693|gb|EEE90240.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  150 bits (379), Expect = 1e-34
 Identities = 71/111 (63%), Positives = 84/111 (75%)
 Frame = -3

Query: 336 MGIESLGGLAIHKILSKLGPKDTAIVGCVNHGFQDWASDESLWSLFCAQDLHLSLPHDPF 157
           MG+ES+G LA++ IL+KLGPK+T  V CV+  F+D AS+ESLWSLFC QDL LS P D  
Sbjct: 1   MGLESVGDLALNIILTKLGPKETVQVLCVSKKFKDLASEESLWSLFCRQDLDLSAPLDHH 60

Query: 156 GNVAPSFKAAYQSWRESFGMYSWPLVLRVKTCWDRIRSWLLVNFPEALTTL 4
           GN  PSFKA Y+ WRE+F MY WPLV RVK+CWDR+ SWL  NFPE   TL
Sbjct: 61  GNHLPSFKATYKLWREAFHMYPWPLVKRVKSCWDRLTSWLTANFPEVKATL 111


>ref|NP_563759.1| F-box protein SKIP16 [Arabidopsis thaliana]
           gi|75264072|sp|Q9LND7.1|SKI16_ARATH RecName: Full=F-box
           protein SKIP16; AltName: Full=SKP1-interacting partner
           16 gi|8810473|gb|AAF80134.1|AC024174_16 Contains
           similarity to a F-box protein FBA from Mus musculus
           gb|AF233226. ESTs gb|AV536237, gb|AV541425, gb|AV542477,
           gb|AV543534, gb|AV536862, gb|AI100662, gb|Z27285,
           gb|Z29939, gb|T21404, gb|T44511, gb|H37689 come from
           this gene [Arabidopsis thaliana]
           gi|16930491|gb|AAL31931.1|AF419599_1 At1g06110/T21E18_13
           [Arabidopsis thaliana] gi|20466211|gb|AAM20423.1|
           unknown protein [Arabidopsis thaliana]
           gi|25084008|gb|AAN72153.1| unknown protein [Arabidopsis
           thaliana] gi|332189819|gb|AEE27940.1| F-box protein
           SKIP16 [Arabidopsis thaliana]
          Length = 436

 Score =  144 bits (364), Expect = 6e-33
 Identities = 65/112 (58%), Positives = 83/112 (74%)
 Frame = -3

Query: 336 MGIESLGGLAIHKILSKLGPKDTAIVGCVNHGFQDWASDESLWSLFCAQDLHLSLPHDPF 157
           MG+E  G L +H +LSK+GP++TA V CV+   +  AS+ESLWS+FC+ DL++S P DP 
Sbjct: 1   MGLEDAGDLVLHIVLSKIGPENTARVACVSKRLKVSASEESLWSIFCSNDLNISTPLDPH 60

Query: 156 GNVAPSFKAAYQSWRESFGMYSWPLVLRVKTCWDRIRSWLLVNFPEALTTLR 1
           G+ APSFK AYQ WRESF MY W LV RV+ CWD ++ WL +NFPEA  TLR
Sbjct: 61  GDPAPSFKRAYQLWRESFRMYPWNLVKRVRLCWDNLKQWLTLNFPEAKATLR 112


>emb|CBI36722.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/112 (61%), Positives = 80/112 (71%)
 Frame = -3

Query: 336 MGIESLGGLAIHKILSKLGPKDTAIVGCVNHGFQDWASDESLWSLFCAQDLHLSLPHDPF 157
           MG+E LG LAI+ I+SKL  KDT  V CV+   +  AS+ESLW   C+QDL LS P DP 
Sbjct: 1   MGLEDLGDLAINAIISKLDTKDTVAVSCVSKKLRVSASEESLWLNHCSQDLGLSAPIDPL 60

Query: 156 GNVAPSFKAAYQSWRESFGMYSWPLVLRVKTCWDRIRSWLLVNFPEALTTLR 1
           G  APSFK  Y+ WRESFGMY WPLV RVK CWDR+++WL  NFPEA  TLR
Sbjct: 61  GKPAPSFKETYRLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPEADATLR 112


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