BLASTX nr result

ID: Angelica23_contig00026094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026094
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28472.1| polyprotein [Ananas comosus]                           297   2e-78
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   286   5e-75
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   285   1e-74
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   283   3e-74
gb|AAX96125.1| retrotransposon protein, putative, unclassified [...   281   1e-73

>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  297 bits (761), Expect = 2e-78
 Identities = 138/259 (53%), Positives = 183/259 (70%), Gaps = 1/259 (0%)
 Frame = +3

Query: 27   QYYMTEELLQYQGRWVIGGHGNLRKQIFEELHSNGIGGHSGIKATVRRIGDYFSWTTIKQ 206
            +Y   ++ L+ +G+ V+G    L+ Q+    H++ IGGHSG++AT R++   F W  +++
Sbjct: 682  RYTWVQDQLRRKGKLVVGSDPGLKLQLIHNFHASSIGGHSGMEATTRKLKGQFYWKGLRR 741

Query: 207  DIGRWVRECVVCQETKGENMKKPGLLQPLAIPRVPWREIAMDFITGLPKSQGFEVIWVVV 386
            D+ ++VREC VCQ+ K E     GLLQPL IP   W EI+MDFI GLP SQG EVI VVV
Sbjct: 742  DVEQFVRECSVCQQNKYETTAPAGLLQPLPIPEGIWTEISMDFIEGLPNSQGKEVIMVVV 801

Query: 387  DRFSRYAHFVALQHPISTKGLAQTFFDNIYKLHGLPESIVSDRDSMFLSEFWQNLFKICG 566
            DR S+YAHF+AL HP +   +AQ F DNIYKLHG+P SIVSDRD++F+S+FWQ LFK   
Sbjct: 802  DRLSKYAHFIALSHPYTASSVAQLFLDNIYKLHGMPRSIVSDRDTIFVSQFWQELFKRLQ 861

Query: 567  TRLCLSTAYHPQFDGCIERVNQCLEQYLRGMTSQVPKNWAGWLSAAEWWYNTTFHTTLNS 746
             ++ LSTAYHPQ DG  E VN+CLE YLR M  + PK WA WL  AEWWYNT++H++  +
Sbjct: 862  VKVNLSTAYHPQSDGQTEVVNRCLENYLRCMAGERPKEWAKWLPLAEWWYNTSYHSSTKA 921

Query: 747  TPYQVVYG-TKPRHIAWLS 800
            TPY+VVYG   P H+ +L+
Sbjct: 922  TPYEVVYGQPPPLHVPYLA 940


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  286 bits (731), Expect = 5e-75
 Identities = 136/250 (54%), Positives = 168/250 (67%)
 Frame = +3

Query: 30   YYMTEELLQYQGRWVIGGHGNLRKQIFEELHSNGIGGHSGIKATVRRIGDYFSWTTIKQD 209
            Y +   +L+Y+GR  +G    LR  I   LH + +GGHSG  AT +R+   F W  +K++
Sbjct: 894  YTLNAGVLRYKGRIYVGKDPELRLNIIHSLHMSAVGGHSGRVATYQRVKHLFYWPGMKKE 953

Query: 210  IGRWVRECVVCQETKGENMKKPGLLQPLAIPRVPWREIAMDFITGLPKSQGFEVIWVVVD 389
            I   VREC VCQ +K E+   PGLL+PL IP + W  I+MDFI GLP S+G EVI+VVVD
Sbjct: 954  IHTMVRECAVCQRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEGLPSSKGKEVIFVVVD 1013

Query: 390  RFSRYAHFVALQHPISTKGLAQTFFDNIYKLHGLPESIVSDRDSMFLSEFWQNLFKICGT 569
            RF++YAH V L HP S + +AQ F DNI+KLHG P +IVSDRD +F S+ WQ LFK    
Sbjct: 1014 RFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHGFPIAIVSDRDRIFTSKLWQELFKSMKV 1073

Query: 570  RLCLSTAYHPQFDGCIERVNQCLEQYLRGMTSQVPKNWAGWLSAAEWWYNTTFHTTLNST 749
            +L  STAYHPQ DG  ERVNQC+E YLR M  Q PK W  WL  AEWWYNTTFHT L  +
Sbjct: 1074 QLRFSTAYHPQTDGQTERVNQCVESYLRCMAMQEPKKWVSWLPLAEWWYNTTFHTALKLS 1133

Query: 750  PYQVVYGTKP 779
            P+Q +YG  P
Sbjct: 1134 PFQALYGFPP 1143


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  285 bits (728), Expect = 1e-74
 Identities = 133/257 (51%), Positives = 175/257 (68%), Gaps = 1/257 (0%)
 Frame = +3

Query: 21   PQQYYMTEE-LLQYQGRWVIGGHGNLRKQIFEELHSNGIGGHSGIKATVRRIGDYFSWTT 197
            P+++Y  E  LL+Y+GR  +G    +R  + E  H++  GGHSGI+AT  RI   F W  
Sbjct: 1165 PERHYKLESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPG 1224

Query: 198  IKQDIGRWVRECVVCQETKGENMKKPGLLQPLAIPRVPWREIAMDFITGLPKSQGFEVIW 377
            +K+ +  ++REC  CQ TK E++  PGLL PL +P + W  I MDFI GLPKSQG +VI 
Sbjct: 1225 LKKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVIL 1284

Query: 378  VVVDRFSRYAHFVALQHPISTKGLAQTFFDNIYKLHGLPESIVSDRDSMFLSEFWQNLFK 557
            VVVDR ++YAHF+AL HP + + + Q F DNI+KLHG+P  IV+DRD +F S F+Q +FK
Sbjct: 1285 VVVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFK 1344

Query: 558  ICGTRLCLSTAYHPQFDGCIERVNQCLEQYLRGMTSQVPKNWAGWLSAAEWWYNTTFHTT 737
                +L  STA+HPQ DG  ERVNQCLE YLR MT Q P+ W  WL+ AEWWYNTT+HT+
Sbjct: 1345 TQKVKLRFSTAHHPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTS 1404

Query: 738  LNSTPYQVVYGTKPRHI 788
            +  TP+Q +YG  P  I
Sbjct: 1405 IQMTPFQALYGYPPPQI 1421


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  283 bits (725), Expect = 3e-74
 Identities = 129/258 (50%), Positives = 176/258 (68%)
 Frame = +3

Query: 27   QYYMTEELLQYQGRWVIGGHGNLRKQIFEELHSNGIGGHSGIKATVRRIGDYFSWTTIKQ 206
            +Y     +++Y+GR  +G  G +R Q+ +  HS+  GGH GI+AT +RI   F W  +K+
Sbjct: 512  EYKFEAGIMKYKGRIYVGETGEIRGQLIQAYHSSTFGGHCGIRATYQRIKKLFYWPGLKK 571

Query: 207  DIGRWVRECVVCQETKGENMKKPGLLQPLAIPRVPWREIAMDFITGLPKSQGFEVIWVVV 386
             +   +R C VCQ TK E++  PGLL PL +P + W  I+MDF+ GLPKS+G +VI VVV
Sbjct: 572  GVENHIRNCPVCQVTKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKGKDVILVVV 631

Query: 387  DRFSRYAHFVALQHPISTKGLAQTFFDNIYKLHGLPESIVSDRDSMFLSEFWQNLFKICG 566
            DR ++YAHF+AL HP + + + Q F DNI+KLHG+P +IV+DRD +F S F+Q +FK   
Sbjct: 632  DRLTKYAHFIALSHPYTVEEVVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVFKSQK 691

Query: 567  TRLCLSTAYHPQFDGCIERVNQCLEQYLRGMTSQVPKNWAGWLSAAEWWYNTTFHTTLNS 746
             +L  STAYHPQ DG  ERVNQCLE YLR MT Q P+NW  W++ AEWWYNTT+HT +  
Sbjct: 692  VQLRFSTAYHPQTDGQTERVNQCLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQM 751

Query: 747  TPYQVVYGTKPRHIAWLS 800
            TP++ +YG  P  I+  S
Sbjct: 752  TPFKALYGYSPPQISEFS 769


>gb|AAX96125.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|77550700|gb|ABA93497.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  281 bits (719), Expect = 1e-73
 Identities = 130/274 (47%), Positives = 179/274 (65%)
 Frame = +3

Query: 30   YYMTEELLQYQGRWVIGGHGNLRKQIFEELHSNGIGGHSGIKATVRRIGDYFSWTTIKQD 209
            Y + + L++Y+GR  +G +  L+ +IF  LH + IGGHSG   T RRI   F+W  +K+ 
Sbjct: 942  YKLKDGLIRYKGRIWLGHNSALQNKIFSALHDSSIGGHSGFPVTYRRIKTLFAWPDMKKQ 1001

Query: 210  IGRWVRECVVCQETKGENMKKPGLLQPLAIPRVPWREIAMDFITGLPKSQGFEVIWVVVD 389
            I   V+EC +CQ+ K +  + PGLLQPL +P   W+ + MDFI GLPKS+ F  I VVVD
Sbjct: 1002 IKLKVKECSICQQAKPDRFRYPGLLQPLLVPSGAWQTVTMDFIEGLPKSRRFNCIMVVVD 1061

Query: 390  RFSRYAHFVALQHPISTKGLAQTFFDNIYKLHGLPESIVSDRDSMFLSEFWQNLFKICGT 569
            + SRYAHF+ L HP S   +AQ + + ++KLHGLP ++VSD D +F S FW+ LF+   T
Sbjct: 1062 KLSRYAHFLPLAHPFSAADVAQLYMEGVFKLHGLPLAVVSDHDKIFTSNFWEQLFQSVST 1121

Query: 570  RLCLSTAYHPQFDGCIERVNQCLEQYLRGMTSQVPKNWAGWLSAAEWWYNTTFHTTLNST 749
            +L +STAYHPQ DG  ERVNQCLE YLR  T   P  W+ WL  AE+WYNTT+H+TL  T
Sbjct: 1122 KLHMSTAYHPQTDGQTERVNQCLETYLRCFTHSCPSKWSTWLYLAEYWYNTTYHSTLEQT 1181

Query: 750  PYQVVYGTKPRHIAWLSKNHSNIGSFESLLEKKR 851
            P++V+YG  P  +  +S N   +   +  L ++R
Sbjct: 1182 PFEVLYGHTPNQLG-ISVNSCELPDVQQWLSERR 1214


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