BLASTX nr result

ID: Angelica23_contig00026085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026085
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321443.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containi...   164   5e-39
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38
ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38
emb|CBI41122.3| unnamed protein product [Vitis vinifera]              161   6e-38

>ref|XP_002321443.1| predicted protein [Populus trichocarpa] gi|222868439|gb|EEF05570.1|
           predicted protein [Populus trichocarpa]
          Length = 723

 Score =  172 bits (436), Expect = 3e-41
 Identities = 80/103 (77%), Positives = 92/103 (89%)
 Frame = -2

Query: 310 NDPAAHVLLSNLYASTSQWDHVTEIRKGMKERNVVKEVGCSWIETGNKVHKFYVGDTSHP 131
           +DPAA++LLSNL+AS  QW+ V EIRK MKERN+ KE GCSWIE  NKVHKFYVGDTSHP
Sbjct: 552 HDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHP 611

Query: 130 QAREIYEELDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQ 2
           QA+EIY+ELDQLA+KIK+LGYIP T+FVLH+V EEQKEQYLFQ
Sbjct: 612 QAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQ 654


>ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  164 bits (416), Expect = 5e-39
 Identities = 74/103 (71%), Positives = 91/103 (88%)
 Frame = -2

Query: 310 NDPAAHVLLSNLYASTSQWDHVTEIRKGMKERNVVKEVGCSWIETGNKVHKFYVGDTSHP 131
           +DPAA++LLSNLYASTS+WD V+ IRK MKE+N++KE GCSW+E  NKVHKFYVGDTSHP
Sbjct: 678 HDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHP 737

Query: 130 QAREIYEELDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQ 2
           +A EIY+EL  L+VKIKKLGY+P+ +FVLH+V EEQKE+ LFQ
Sbjct: 738 KAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQ 780


>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  161 bits (407), Expect = 6e-38
 Identities = 72/103 (69%), Positives = 91/103 (88%)
 Frame = -2

Query: 310 NDPAAHVLLSNLYASTSQWDHVTEIRKGMKERNVVKEVGCSWIETGNKVHKFYVGDTSHP 131
           +DPAA++LLSNL+AS  QW  V +IRK MKERN++KE GCSWIE  N+VH+F+VG+TSHP
Sbjct: 638 DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHP 697

Query: 130 QAREIYEELDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQ 2
           QA +IY+ELDQLA KIK++GYIPDT+FVLH++ EEQKEQ+LFQ
Sbjct: 698 QAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQ 740


>ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  161 bits (407), Expect = 6e-38
 Identities = 72/103 (69%), Positives = 91/103 (88%)
 Frame = -2

Query: 310 NDPAAHVLLSNLYASTSQWDHVTEIRKGMKERNVVKEVGCSWIETGNKVHKFYVGDTSHP 131
           +DPAA++LLSNL+AS  QW  V +IRK MKERN++KE GCSWIE  N+VH+F+VG+TSHP
Sbjct: 458 DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHP 517

Query: 130 QAREIYEELDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQ 2
           QA +IY+ELDQLA KIK++GYIPDT+FVLH++ EEQKEQ+LFQ
Sbjct: 518 QAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQ 560


>emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  161 bits (407), Expect = 6e-38
 Identities = 72/103 (69%), Positives = 91/103 (88%)
 Frame = -2

Query: 310 NDPAAHVLLSNLYASTSQWDHVTEIRKGMKERNVVKEVGCSWIETGNKVHKFYVGDTSHP 131
           +DPAA++LLSNL+AS  QW  V +IRK MKERN++KE GCSWIE  N+VH+F+VG+TSHP
Sbjct: 463 DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHP 522

Query: 130 QAREIYEELDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQ 2
           QA +IY+ELDQLA KIK++GYIPDT+FVLH++ EEQKEQ+LFQ
Sbjct: 523 QAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQ 565


Top