BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025900
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containi...   140   2e-31
ref|XP_002516618.1| pentatricopeptide repeat-containing protein,...   126   2e-27
ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containi...   112   6e-23
ref|NP_196692.1| pentatricopeptide repeat-containing protein [Ar...   111   1e-22

>ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial [Vitis vinifera]
           gi|296081989|emb|CBI20994.3| unnamed protein product
           [Vitis vinifera]
          Length = 597

 Score =  140 bits (352), Expect = 2e-31
 Identities = 75/142 (52%), Positives = 98/142 (69%), Gaps = 6/142 (4%)
 Frame = -2

Query: 416 PLNSPKTLLTQNPNP---KTDFTTITDLLTNPNIPPGKPLETALDQTGIKFSHSLFLEIF 246
           P+ + K  L  NPNP   ++DF+TI  LLT+P +  G PLE AL++TGIK    L   IF
Sbjct: 51  PIPTLKQSLNPNPNPNFSQSDFSTICALLTDPALSSGAPLEDALNRTGIKPCSGLLQAIF 110

Query: 245 QHFDSSPKPLFTLFRWAESKNGGEFPLSVFNSMVNVLGKARDFESIWTLILQRNGCEEKP 66
            HFD+SPKPLFTLFRWA  + G E  +++FNSM++VL K+R F+S W L+L R    E+P
Sbjct: 111 SHFDASPKPLFTLFRWAMKQPGFESSMTLFNSMIDVLAKSRAFDSAWLLVLDRIEGGEEP 170

Query: 65  DF---DTFAILIRRYARAGMFL 9
           +    +TFA+LIRRYARAGM L
Sbjct: 171 ELVSSNTFAVLIRRYARAGMTL 192


>ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544438|gb|EEF45959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 577

 Score =  126 bits (317), Expect = 2e-27
 Identities = 70/136 (51%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
 Frame = -2

Query: 419 PPLNSPKTLLTQNPN-PKTDFTTITDLLTNPNIPPGKPLETALDQTGIKFSHSLFLEIFQ 243
           PPL       T NPN   +DF+T+ +LL++PN+   KPLETALDQTGIK   SL   +F 
Sbjct: 41  PPLPEKLPSPTANPNYSHSDFSTLCNLLSDPNL---KPLETALDQTGIKPETSLLNAVFD 97

Query: 242 HFDSSPKPLFTLFRWAESKNGGEFPLSVFNSMVNVLGKARDFESIWTLILQRNGCEEKPD 63
           HF+SSPK L +LF WA+ +   E   ++FNS++N LGK ++F+S W L+L R G      
Sbjct: 98  HFNSSPKLLHSLFVWADKQPEFESSTTLFNSVINALGKMKEFDSAWCLVLDRTGLVSS-- 155

Query: 62  FDTFAILIRRYARAGM 15
            DTFAILIRRY RAGM
Sbjct: 156 -DTFAILIRRYTRAGM 170


>ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|222854612|gb|EEE92159.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  125 bits (314), Expect = 5e-27
 Identities = 70/146 (47%), Positives = 90/146 (61%), Gaps = 6/146 (4%)
 Frame = -2

Query: 434 HFSTNPPLNSPKTLLTQNPNP---KTDFTTITDLLTNPNIPPGKPLETALDQTGIKFSHS 264
           + + +P  +   +  T N NP   + DF T+ ++L +P I  G  L TALD+TGI+    
Sbjct: 55  NLAPSPSADQQNSSPTSNSNPNYHQNDFFTLCNILKDPKIQLGPSLRTALDRTGIEPELG 114

Query: 263 LFLEIFQHFDSSPKPLFTLFRWAESKNGGEFPLSVFNSMVNVLGKARDFESIWTLILQRN 84
           L   +F HFDSSPK L ++F WAE K G +   ++FNSMVN LGKAR+F S W L+L R 
Sbjct: 115 LIQSVFDHFDSSPKLLHSVFLWAEKKPGFQSSAALFNSMVNFLGKAREFGSAWCLLLDRI 174

Query: 83  GCEEKPDF---DTFAILIRRYARAGM 15
           G  E  D    DTFAILIRRY RAGM
Sbjct: 175 GGNEGGDLVSSDTFAILIRRYTRAGM 200


>ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
           gi|449503560|ref|XP_004162063.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
          Length = 615

 Score =  112 bits (279), Expect = 6e-23
 Identities = 61/123 (49%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
 Frame = -2

Query: 365 DFTTITDLLTNPNIPPGKPLETALDQTGIKFSHSLFLEIFQHFDSSPKPLFTLFRWAESK 186
           D +TI+ +L++ ++ PG  LE ALD+TGI  S SL   +F HFDSSPK L +LF WA  K
Sbjct: 88  DLSTISSILSDRSVRPGAALEDALDRTGIVPSSSLLEAVFDHFDSSPKFLHSLFLWAAKK 147

Query: 185 NGGEFPLSVFNSMVNVLGKARDFESIWTLILQR-NGCEEK--PDFDTFAILIRRYARAGM 15
           +G     ++FN ++NVL K+R+F+S W+LI  R  G EE      + F ILIRRYARAGM
Sbjct: 148 SGFRPSAALFNRLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARAGM 207

Query: 14  FLP 6
             P
Sbjct: 208 VQP 210


>ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g11310, mitochondrial; Flags: Precursor
           gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis
           thaliana] gi|110738090|dbj|BAF00978.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332004275|gb|AED91658.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  111 bits (277), Expect = 1e-22
 Identities = 61/127 (48%), Positives = 82/127 (64%), Gaps = 3/127 (2%)
 Frame = -2

Query: 386 QNPNPKTDFTTITDLLTNPNIPPGKPLETALDQTGIKFSHSLFLEIFQHFDSSPKPLFTL 207
           QN   KTD +TI++LL N ++ PG  LE+ALD+TGI+ S  L   +F    SSP  L ++
Sbjct: 62  QNTVSKTDLSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSV 121

Query: 206 FRWAESKNGGEFPLSVFNSMVNVLGKARDFESIWTLILQRNGCEEKPDF---DTFAILIR 36
           F+WAE K G     S+F+S+VN L KAR+FE  W+L+  R   +E  +    DTF +LIR
Sbjct: 122 FKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIR 181

Query: 35  RYARAGM 15
           RYARAGM
Sbjct: 182 RYARAGM 188