BLASTX nr result

ID: Angelica23_contig00025823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025823
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi...    85   8e-15
emb|CAN64878.1| hypothetical protein VITISV_030794 [Vitis vinifera]    83   3e-14
ref|XP_003522982.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...    80   2e-13
ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...    78   1e-12
ref|XP_002528998.1| DNA binding protein, putative [Ricinus commu...    78   1e-12

>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
           gi|297745602|emb|CBI40767.3| unnamed protein product
           [Vitis vinifera]
          Length = 492

 Score = 84.7 bits (208), Expect = 8e-15
 Identities = 44/76 (57%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
 Frame = -3

Query: 470 AFDEARLQLIKEEAELERSISGIS-VQMEEFQNKIMHFEEFDLEVEKESQQLEQLKNLLF 294
           A+ +A+  L +EE ++ER+ISGI+ VQM+E ++KI+HFEEF+L +EKE QQL+Q+KNLLF
Sbjct: 405 AYVDAKSLLEREELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEWQQLQQMKNLLF 464

Query: 293 GDQLALLFHKNAGSKS 246
            DQL LLF K A  K+
Sbjct: 465 VDQLTLLFQKAAAPKT 480


>emb|CAN64878.1| hypothetical protein VITISV_030794 [Vitis vinifera]
          Length = 422

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/76 (56%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
 Frame = -3

Query: 470 AFDEARLQLIKEEAELERSISGIS-VQMEEFQNKIMHFEEFDLEVEKESQQLEQLKNLLF 294
           A+ +A+  L +EE ++ER+ISGI+ VQM+E ++KI+HFEEF+L +EKE QQL+Q+K LLF
Sbjct: 335 AYVDAKSLLEREELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEXQQLQQMKXLLF 394

Query: 293 GDQLALLFHKNAGSKS 246
            DQL LLF K A  K+
Sbjct: 395 VDQLTLLFQKAAAPKT 410


>ref|XP_003522982.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 484

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/72 (54%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
 Frame = -3

Query: 458 ARLQLIKEEAELERSISGI-SVQMEEFQNKIMHFEEFDLEVEKESQQLEQLKNLLFGDQL 282
           A +QL KEE ++E++IS I  VQM+  Q+K++HFE+ DL +EKE QQ+EQ+KN+ F DQL
Sbjct: 411 ANIQLEKEELDVEKAISEIIEVQMKNIQDKLVHFEDLDLLMEKEGQQMEQMKNMFFLDQL 470

Query: 281 ALLFHKNAGSKS 246
            LLFHK++  K+
Sbjct: 471 TLLFHKSSAPKT 482


>ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 491

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 39/72 (54%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
 Frame = -3

Query: 458 ARLQLIKEEAELERSISGI-SVQMEEFQNKIMHFEEFDLEVEKESQQLEQLKNLLFGDQL 282
           A +QL KEE ++E++IS I  VQM+  Q+K++ FE+ DL +EKE QQLEQ+KN+ F DQL
Sbjct: 405 ANIQLEKEELDVEKAISEIIEVQMKNIQDKLVQFEDLDLLMEKEGQQLEQMKNMFFLDQL 464

Query: 281 ALLFHKNAGSKS 246
            LLFHK++  K+
Sbjct: 465 TLLFHKSSAPKT 476


>ref|XP_002528998.1| DNA binding protein, putative [Ricinus communis]
           gi|223531538|gb|EEF33368.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 482

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 51/114 (44%), Positives = 66/114 (57%), Gaps = 17/114 (14%)
 Frame = -3

Query: 518 KEKVGSLMVGSTRHQEAFD----------------EARLQLIKEEAELERSISG-ISVQM 390
           K  +GS    STR Q A D                +A   L KEE + ER+IS  + VQ+
Sbjct: 365 KSSLGSFS-RSTREQGAIDASNGNAEQNGCERTSLDANSLLEKEELDAERAISRLVEVQL 423

Query: 389 EEFQNKIMHFEEFDLEVEKESQQLEQLKNLLFGDQLALLFHKNAGSKSHAVAED 228
           +E Q+KI+ FE+ DL +EKE QQLEQ+KNLLF DQL LLFHK +  K+    E+
Sbjct: 424 KEIQDKIIRFEKLDLLMEKEWQQLEQVKNLLFVDQLTLLFHKKSAPKTEEHVEE 477


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