BLASTX nr result

ID: Angelica23_contig00025767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025767
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa...   186   6e-45
ref|NP_190479.1| signal recognition particle subunit SRP9 [Arabi...   186   8e-45
ref|XP_002875940.1| hypothetical protein ARALYDRAFT_906164 [Arab...   185   1e-44
ref|XP_002302071.1| predicted protein [Populus trichocarpa] gi|2...   185   1e-44
gb|AFK36667.1| unknown [Lotus japonicus]                              184   2e-44

>ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa protein [Vitis
           vinifera] gi|297735510|emb|CBI17950.3| unnamed protein
           product [Vitis vinifera]
          Length = 103

 Score =  186 bits (472), Expect = 6e-45
 Identities = 89/103 (86%), Positives = 95/103 (92%)
 Frame = -1

Query: 676 MVYITSWDDFVERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQAQDAK 497
           MVYI SWD+FV+RSVQLFRA PD TRYVMKYR+CDGKLVLKVTD++ECLKFKTDQAQDAK
Sbjct: 1   MVYIESWDEFVDRSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 496 KMEKLNNIFFTLMARGPEVDFNEVAGKEQAEAQPAKKGRGRKQ 368
           KMEKLNNIFFTLMARGPEVD +EV GKE  E QPAKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPEVDISEVTGKEAMEVQPAKKGRGRKQ 103


>ref|NP_190479.1| signal recognition particle subunit SRP9 [Arabidopsis thaliana]
           gi|12230639|sp|Q9SMU7.1|SRP09_ARATH RecName: Full=Signal
           recognition particle 9 kDa protein; Short=SRP9
           gi|6522556|emb|CAB62000.1| signal recognition particle
           subunit 9-like [Arabidopsis thaliana]
           gi|21553473|gb|AAM62566.1| signal recognition particle 9
           kDa protein SRP9 [Arabidopsis thaliana]
           gi|28466801|gb|AAO44009.1| At3g49100 [Arabidopsis
           thaliana] gi|110736135|dbj|BAF00039.1| signal
           recognition particle subunit 9 - like [Arabidopsis
           thaliana] gi|332644977|gb|AEE78498.1| signal recognition
           particle subunit SRP9 [Arabidopsis thaliana]
          Length = 103

 Score =  186 bits (471), Expect = 8e-45
 Identities = 88/103 (85%), Positives = 96/103 (93%)
 Frame = -1

Query: 676 MVYITSWDDFVERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQAQDAK 497
           MVYI SWD+FV+RSVQLFRA P+ TRYVMKYR+CDGKLVLKVTD+KECLKFKTDQAQ+AK
Sbjct: 1   MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60

Query: 496 KMEKLNNIFFTLMARGPEVDFNEVAGKEQAEAQPAKKGRGRKQ 368
           KMEKLNNIFFTLMARGP+VD +EV GKEQ E QPAKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103


>ref|XP_002875940.1| hypothetical protein ARALYDRAFT_906164 [Arabidopsis lyrata subsp.
           lyrata] gi|297321778|gb|EFH52199.1| hypothetical protein
           ARALYDRAFT_906164 [Arabidopsis lyrata subsp. lyrata]
          Length = 103

 Score =  185 bits (469), Expect = 1e-44
 Identities = 87/103 (84%), Positives = 96/103 (93%)
 Frame = -1

Query: 676 MVYITSWDDFVERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQAQDAK 497
           MVYI SWD+FV+RSVQ+FRA P+ TRYVMKYR+CDGKLVLKVTD+KECLKFKTDQAQ+AK
Sbjct: 1   MVYIASWDEFVDRSVQIFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60

Query: 496 KMEKLNNIFFTLMARGPEVDFNEVAGKEQAEAQPAKKGRGRKQ 368
           KMEKLNNIFFTLMARGP+VD +EV GKEQ E QPAKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103


>ref|XP_002302071.1| predicted protein [Populus trichocarpa] gi|222843797|gb|EEE81344.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  185 bits (469), Expect = 1e-44
 Identities = 88/103 (85%), Positives = 94/103 (91%)
 Frame = -1

Query: 676 MVYITSWDDFVERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQAQDAK 497
           MVY+ SWD+FVERSVQLFRA PD TRYVMKYR+CDGKLVLKVTD+KECLKFKTDQAQDAK
Sbjct: 1   MVYMASWDEFVERSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAK 60

Query: 496 KMEKLNNIFFTLMARGPEVDFNEVAGKEQAEAQPAKKGRGRKQ 368
           KMEKLNN FFTLM+RGPE D +EV GKEQ EAQP KKGRGRKQ
Sbjct: 61  KMEKLNNQFFTLMSRGPEADLSEVTGKEQTEAQPGKKGRGRKQ 103


>gb|AFK36667.1| unknown [Lotus japonicus]
          Length = 103

 Score =  184 bits (467), Expect = 2e-44
 Identities = 85/103 (82%), Positives = 98/103 (95%)
 Frame = -1

Query: 676 MVYITSWDDFVERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQAQDAK 497
           MVYITSWD+FV+R+VQL+RA PD TRYVMKYR+CDGKLVLKVTD+K+CLK+KTDQ+Q+AK
Sbjct: 1   MVYITSWDEFVDRTVQLYRADPDSTRYVMKYRHCDGKLVLKVTDNKQCLKYKTDQSQEAK 60

Query: 496 KMEKLNNIFFTLMARGPEVDFNEVAGKEQAEAQPAKKGRGRKQ 368
           KMEKLNNIFFTLMARGPEVD +EV GKEQ +AQPAK+GRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPEVDLSEVTGKEQTDAQPAKRGRGRKQ 103


Top