BLASTX nr result
ID: Angelica23_contig00025699
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00025699
(1057 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera] 341 2e-91
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 339 8e-91
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas... 307 2e-81
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 306 4e-81
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 306 7e-81
>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
Length = 1793
Score = 341 bits (874), Expect = 2e-91
Identities = 162/350 (46%), Positives = 231/350 (66%)
Frame = -1
Query: 1057 LRQGDPISPYLFVICAEGLSTLIQKRQHQGLLHGCKIANGAPIITHLFFADDSYLFFRAT 878
LRQGD +SPYLF++ AEGLS L+++ + G+LHGC +A GAP ++HLFFAD+SYLFF+AT
Sbjct: 1188 LRQGDXLSPYLFILAAEGLSALLKQGERCGVLHGCSVARGAPXVSHLFFADBSYLFFKAT 1247
Query: 877 ITEA*CIKDCLLLYERASDQQVNFNKSCIQFSQNTSSLVSASISQLLQVEVQNDTSFYLG 698
+E+ +K LL Y+ S Q++N NK + FS+NT +V I +LQVE Q D YLG
Sbjct: 1248 ESESRSLKQILLRYQNLSGQEINLNKXALTFSRNTDDVVKRGICSILQVEEQADPGIYLG 1307
Query: 697 LPNFVSRNKREVFSHVKDKVWNRLQSWKGKMISRGGKEILLKSVIQSIPSYVMSVFLLPK 518
+P V +NKR++F V+ KVWNR+Q+W G+ +SR GKEI LK+V QSIP+YVM + LLPK
Sbjct: 1308 MPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPK 1367
Query: 517 TQCEEIENLMNKFWWVSNVENRGGIRWMSWERLCVPKKFGDMGFRRIREFNLAMLGKHA* 338
C +IE++MN F+W SN + R IRWMSW ++C KK G +GFR++ +FNLA+L K
Sbjct: 1368 DLCRDIESMMNXFFWDSNPQXR-SIRWMSWXKMCKQKKDGGLGFRKLEDFNLALLAKQGX 1426
Query: 337 RLMVEPNSFIAKLLHARYYPSKFFREASIGSNPSFVWRSIVEAKNLVCDGSILKVGNGVS 158
R + +S + + ARY+ + F A +GSNPS++WRSI+ A++L+ G + +G
Sbjct: 1427 RFLQNLDSLVTIIFQARYFRNSSFLNAELGSNPSYMWRSILAAQDLLKMGCYWSIASGTK 1486
Query: 157 INIWKDPWIPEISNPKVSTIAPQNLIEAKVSNLFKVNSREWDMEVIRDVF 8
+ +W D W+P SN + T + KV L + W + IRD F
Sbjct: 1487 VQVWGDSWLPNSSNRLIITPHVADFDGIKVDEL--ITKGLWHEDFIRDKF 1534
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 339 bits (869), Expect = 8e-91
Identities = 162/350 (46%), Positives = 229/350 (65%)
Frame = -1
Query: 1057 LRQGDPISPYLFVICAEGLSTLIQKRQHQGLLHGCKIANGAPIITHLFFADDSYLFFRAT 878
LRQ DP+SPYLF++ AEGLS L+++ + G+LHGC +A GA + HLFFADD YLFF+AT
Sbjct: 101 LRQEDPLSPYLFILAAEGLSALLKQGERCGVLHGCSVARGASTVLHLFFADDLYLFFKAT 160
Query: 877 ITEA*CIKDCLLLYERASDQQVNFNKSCIQFSQNTSSLVSASISQLLQVEVQNDTSFYLG 698
+E+ +K LL Y+ S Q++N NKS + FS+NT +V I +LQVE D YLG
Sbjct: 161 ESESRSLKQILLRYQNLSGQEINLNKSALTFSRNTDDVVKRGICSILQVEEXADPGIYLG 220
Query: 697 LPNFVSRNKREVFSHVKDKVWNRLQSWKGKMISRGGKEILLKSVIQSIPSYVMSVFLLPK 518
+P V +NKR++F V+ KVWNR+Q+W G+ +SR GKEI LK+V QSIP+YVM + LLPK
Sbjct: 221 MPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPK 280
Query: 517 TQCEEIENLMNKFWWVSNVENRGGIRWMSWERLCVPKKFGDMGFRRIREFNLAMLGKHA* 338
C +IE++MN F+W SN + R IRWMSW ++C KK G +GFR++ +FNLA+L K
Sbjct: 281 DLCRDIESMMNGFFWDSNPQCR-SIRWMSWGKMCKQKKDGGLGFRKLXDFNLALLAKQGW 339
Query: 337 RLMVEPNSFIAKLLHARYYPSKFFREASIGSNPSFVWRSIVEAKNLVCDGSILKVGNGVS 158
R + P+S + ++ ARY+ + F A +GSNPS++WRSI+ A+ L+ G + +G
Sbjct: 340 RFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYWSIASGTK 399
Query: 157 INIWKDPWIPEISNPKVSTIAPQNLIEAKVSNLFKVNSREWDMEVIRDVF 8
+ +W D W+P+ SN + T KV L + W + IRD F
Sbjct: 400 VQVWGDSWLPDSSNRLIITPPVAGFDGIKVDEL--ITEGLWREDFIRDKF 447
>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 653
Score = 307 bits (787), Expect = 2e-81
Identities = 151/351 (43%), Positives = 219/351 (62%)
Frame = -1
Query: 1057 LRQGDPISPYLFVICAEGLSTLIQKRQHQGLLHGCKIANGAPIITHLFFADDSYLFFRAT 878
LRQGDP+SPYLF++CAEG+STLI++ + +LHG K+ AP ++HL FADDS+LFFRA
Sbjct: 225 LRQGDPLSPYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHLLFADDSFLFFRAN 284
Query: 877 ITEA*CIKDCLLLYERASDQQVNFNKSCIQFSQNTSSLVSASISQLLQVEVQNDTSFYLG 698
E +KD L Y ASDQ +N KS I FS+N ++S +L V YLG
Sbjct: 285 ENETRALKDILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGIRKYLG 344
Query: 697 LPNFVSRNKREVFSHVKDKVWNRLQSWKGKMISRGGKEILLKSVIQSIPSYVMSVFLLPK 518
LP+ + R+K+ +F+++KD++WNR+ KM+S+ GKE+L+KSV Q+IPSY MSVFLLP
Sbjct: 345 LPSMIGRSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPH 404
Query: 517 TQCEEIENLMNKFWWVSNVENRGGIRWMSWERLCVPKKFGDMGFRRIREFNLAMLGKHA* 338
+ ++IE ++N FWW E RGGIRWMSWERL + K++G MGFR I F+LAM GK
Sbjct: 405 SIADDIEKMLNSFWWGMKNEGRGGIRWMSWERLTMRKEWGGMGFRHIHGFDLAMSGKQCW 464
Query: 337 RLMVEPNSFIAKLLHARYYPSKFFREASIGSNPSFVWRSIVEAKNLVCDGSILKVGNGVS 158
+ P++ ++++ A+Y+ ++ F AS+G NPS+VWRSI ++ + G ++G+G +
Sbjct: 465 NFLTNPDAMVSRIFKAKYFTNENFLGASLGHNPSYVWRSIWSSRIFLKTGYQWRIGDGST 524
Query: 157 INIWKDPWIPEISNPKVSTIAPQNLIEAKVSNLFKVNSREWDMEVIRDVFN 5
A VS+L +R W+ +IR+ FN
Sbjct: 525 --------------------------TATVSHLIDAQTRSWNEPLIRNNFN 549
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 306 bits (785), Expect = 4e-81
Identities = 152/352 (43%), Positives = 221/352 (62%)
Frame = -1
Query: 1057 LRQGDPISPYLFVICAEGLSTLIQKRQHQGLLHGCKIANGAPIITHLFFADDSYLFFRAT 878
LRQGDP+SPYLF++CAEG S L+ K + +G LHG +I GAP ++HL FADDS + RA
Sbjct: 889 LRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRAN 948
Query: 877 ITEA*CIKDCLLLYERASDQQVNFNKSCIQFSQNTSSLVSASISQLLQVEVQNDTSFYLG 698
EA ++ L +YE S Q +N +KS + FS NTSSL ++ L ++ + YLG
Sbjct: 949 GGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLG 1008
Query: 697 LPNFVSRNKREVFSHVKDKVWNRLQSWKGKMISRGGKEILLKSVIQSIPSYVMSVFLLPK 518
LP FV R++ ++FS++K+++W R+Q WK K++SR GKEIL+K+V Q+IP++ M F L K
Sbjct: 1009 LPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTK 1068
Query: 517 TQCEEIENLMNKFWWVSNVENRGGIRWMSWERLCVPKKFGDMGFRRIREFNLAMLGKHA* 338
C++I ++ K+WW SN E + W+SW +L +PK G +GFR I FNLAML K
Sbjct: 1069 DLCDQISKMIAKYWW-SNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGW 1127
Query: 337 RLMVEPNSFIAKLLHARYYPSKFFREASIGSNPSFVWRSIVEAKNLVCDGSILKVGNGVS 158
RL+ +P+S +++L A+Y+P SN S+ WRSI + ++ +G I +VG+G
Sbjct: 1128 RLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSK 1187
Query: 157 INIWKDPWIPEISNPKVSTIAPQNLIEAKVSNLFKVNSREWDMEVIRDVFNE 2
INIW DPWIP + K T NL+ KV L + WD +++ F E
Sbjct: 1188 INIWADPWIPRGWSRKPMTPRGANLV-TKVEELIDPYTGTWDEDLLSQTFWE 1238
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 306 bits (783), Expect = 7e-81
Identities = 152/352 (43%), Positives = 220/352 (62%)
Frame = -1
Query: 1057 LRQGDPISPYLFVICAEGLSTLIQKRQHQGLLHGCKIANGAPIITHLFFADDSYLFFRAT 878
LRQGDP+SPYLF++CAEG S L+ K + +G LHG +I GAP ++HL FADDS + RA
Sbjct: 834 LRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRAN 893
Query: 877 ITEA*CIKDCLLLYERASDQQVNFNKSCIQFSQNTSSLVSASISQLLQVEVQNDTSFYLG 698
EA ++ L +YE S Q +N +KS + FS NTSSL ++ L ++ + YLG
Sbjct: 894 GGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLG 953
Query: 697 LPNFVSRNKREVFSHVKDKVWNRLQSWKGKMISRGGKEILLKSVIQSIPSYVMSVFLLPK 518
LP FV R++ ++FS++K+++W R+Q WK K++SR GKEIL+K+V Q IP++ M F L K
Sbjct: 954 LPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTK 1013
Query: 517 TQCEEIENLMNKFWWVSNVENRGGIRWMSWERLCVPKKFGDMGFRRIREFNLAMLGKHA* 338
C++I ++ K+WW SN E + W+SW +L +PK G +GFR I FNLAML K
Sbjct: 1014 DLCDQISKMIAKYWW-SNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGW 1072
Query: 337 RLMVEPNSFIAKLLHARYYPSKFFREASIGSNPSFVWRSIVEAKNLVCDGSILKVGNGVS 158
RL+ +P+S +++L A+Y+P SN S+ WRSI + ++ +G I +VG+G
Sbjct: 1073 RLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSK 1132
Query: 157 INIWKDPWIPEISNPKVSTIAPQNLIEAKVSNLFKVNSREWDMEVIRDVFNE 2
INIW DPWIP + K T NL+ KV L + WD +++ F E
Sbjct: 1133 INIWADPWIPRGWSRKPMTPRGANLV-TKVEELIDPYTGTWDEDLLSQTFWE 1183