BLASTX nr result

ID: Angelica23_contig00025678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025678
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308937.1| ABC transporter family, cholesterol/phosphol...   105   5e-21
ref|NP_001031526.1| ABC transporter A family member 1 [Arabidops...   102   6e-20
ref|NP_850354.2| ABC transporter A family member 1 [Arabidopsis ...   102   6e-20
ref|XP_002881791.1| ATPase, coupled to transmembrane movement of...   102   6e-20
gb|AAK39643.3| ATP-binding cassette transporter AtABCA1 [Arabido...   102   6e-20

>ref|XP_002308937.1| ABC transporter family, cholesterol/phospholipid flippase [Populus
            trichocarpa] gi|222854913|gb|EEE92460.1| ABC transporter
            family, cholesterol/phospholipid flippase [Populus
            trichocarpa]
          Length = 1891

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/60 (80%), Positives = 57/60 (95%)
 Frame = -3

Query: 641  STFQGCNGLSIKYQLPHGEDLLIADVFGHIERNRNRLGIADYSISQSTLETIFNHFAANS 462
            + FQGCNGLS+KYQLP+ +DL +ADVFGHIE+NRN+LGIA+YSISQSTLETIFNHFAA+S
Sbjct: 1832 AAFQGCNGLSVKYQLPYSKDLSLADVFGHIEQNRNQLGIAEYSISQSTLETIFNHFAASS 1891


>ref|NP_001031526.1| ABC transporter A family member 1 [Arabidopsis thaliana]
            gi|330254924|gb|AEC10018.1| ABC transporter A family
            member 1 [Arabidopsis thaliana]
          Length = 1846

 Score =  102 bits (254), Expect = 6e-20
 Identities = 50/61 (81%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
 Frame = -3

Query: 641  STFQGCNGLSIKYQLPHGED-LLIADVFGHIERNRNRLGIADYSISQSTLETIFNHFAAN 465
            +TF+ CNGLSIKYQLP GE  L +AD FGH+ERNRNRLGIA+YSISQSTLETIFNHFAAN
Sbjct: 1786 ATFKSCNGLSIKYQLPFGEGGLSLADAFGHLERNRNRLGIAEYSISQSTLETIFNHFAAN 1845

Query: 464  S 462
            S
Sbjct: 1846 S 1846


>ref|NP_850354.2| ABC transporter A family member 1 [Arabidopsis thaliana]
            gi|75327922|sp|Q84M24.2|AB1A_ARATH RecName: Full=ABC
            transporter A family member 1; Short=ABC transporter
            ABCA.1; Short=AtABCA1; AltName: Full=ABC one homolog
            protein 1; Short=AtAOH1 gi|45504175|dbj|BAC75958.2|
            AtABCA1 [Arabidopsis thaliana]
            gi|330254923|gb|AEC10017.1| ABC transporter A family
            member 1 [Arabidopsis thaliana]
          Length = 1882

 Score =  102 bits (254), Expect = 6e-20
 Identities = 50/61 (81%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
 Frame = -3

Query: 641  STFQGCNGLSIKYQLPHGED-LLIADVFGHIERNRNRLGIADYSISQSTLETIFNHFAAN 465
            +TF+ CNGLSIKYQLP GE  L +AD FGH+ERNRNRLGIA+YSISQSTLETIFNHFAAN
Sbjct: 1822 ATFKSCNGLSIKYQLPFGEGGLSLADAFGHLERNRNRLGIAEYSISQSTLETIFNHFAAN 1881

Query: 464  S 462
            S
Sbjct: 1882 S 1882


>ref|XP_002881791.1| ATPase, coupled to transmembrane movement of substances [Arabidopsis
            lyrata subsp. lyrata] gi|297327630|gb|EFH58050.1| ATPase,
            coupled to transmembrane movement of substances
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1914

 Score =  102 bits (254), Expect = 6e-20
 Identities = 50/61 (81%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
 Frame = -3

Query: 641  STFQGCNGLSIKYQLPHGED-LLIADVFGHIERNRNRLGIADYSISQSTLETIFNHFAAN 465
            +TF+ CNGLSIKYQLP GE  L +AD FGH+ERNRNRLGIA+YSISQSTLETIFNHFAAN
Sbjct: 1854 ATFKSCNGLSIKYQLPFGEGGLSLADAFGHLERNRNRLGIAEYSISQSTLETIFNHFAAN 1913

Query: 464  S 462
            S
Sbjct: 1914 S 1914


>gb|AAK39643.3| ATP-binding cassette transporter AtABCA1 [Arabidopsis thaliana]
          Length = 1882

 Score =  102 bits (254), Expect = 6e-20
 Identities = 50/61 (81%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
 Frame = -3

Query: 641  STFQGCNGLSIKYQLPHGED-LLIADVFGHIERNRNRLGIADYSISQSTLETIFNHFAAN 465
            +TF+ CNGLSIKYQLP GE  L +AD FGH+ERNRNRLGIA+YSISQSTLETIFNHFAAN
Sbjct: 1822 ATFKSCNGLSIKYQLPFGEGGLSLADAFGHLERNRNRLGIAEYSISQSTLETIFNHFAAN 1881

Query: 464  S 462
            S
Sbjct: 1882 S 1882


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