BLASTX nr result

ID: Angelica23_contig00025614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025614
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi...   191   5e-47
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...   191   7e-47
emb|CBI30711.3| unnamed protein product [Vitis vinifera]              191   7e-47
ref|XP_003629790.1| Pentatricopeptide repeat-containing protein ...   190   1e-46

>ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  196 bits (498), Expect = 2e-48
 Identities = 88/125 (70%), Positives = 106/125 (84%)
 Frame = -2

Query: 377 LLDEGWCLFNIMRNDCKIEPTLEHYTCMVDLLSRAGKLSKAYSFIKNMPIKADCFIWGVL 198
           LLDEGW  FN+M+++C ++P LEHY C+VDLL+R+GKL+ AY FIK+MPI+ D  IWG L
Sbjct: 315 LLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGAL 374

Query: 197 LRGCRIHHDLKLAEKVAEHIFQLEPDNTEYYVLLANSYAEAEQWEEVKKLRQKIGLHGPK 18
           L GCRIHHD+KLAEKVAEH+F+LEP+NT YYVLLAN+YAEAE+WEEVKKLRQKIG  G K
Sbjct: 375 LSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLK 434

Query: 17  KERDC 3
           K   C
Sbjct: 435 KNPGC 439


>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
            gi|449500809|ref|XP_004161200.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  191 bits (485), Expect = 5e-47
 Identities = 90/125 (72%), Positives = 102/125 (81%)
 Frame = -2

Query: 377  LLDEGWCLFNIMRNDCKIEPTLEHYTCMVDLLSRAGKLSKAYSFIKNMPIKADCFIWGVL 198
            LLDEGW +FNIM+ +C+IEP LEHY CMVDLL+R G L KA+ FIK MPIK D  IWG L
Sbjct: 670  LLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGAL 729

Query: 197  LRGCRIHHDLKLAEKVAEHIFQLEPDNTEYYVLLANSYAEAEQWEEVKKLRQKIGLHGPK 18
            L GCRIHHD+KLAEKVAE IF+LEP+NT YYVLLAN YAEAE+WEEV+KLR+KIG  G K
Sbjct: 730  LCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLK 789

Query: 17   KERDC 3
            K   C
Sbjct: 790  KNPGC 794


>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  191 bits (484), Expect = 7e-47
 Identities = 89/125 (71%), Positives = 103/125 (82%)
 Frame = -2

Query: 377 LLDEGWCLFNIMRNDCKIEPTLEHYTCMVDLLSRAGKLSKAYSFIKNMPIKADCFIWGVL 198
           LLDEGW  FN+MRN+C IEP  EHY C+VDLL+RAG LSKAY FIK MPI+ D  IWG L
Sbjct: 568 LLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGAL 627

Query: 197 LRGCRIHHDLKLAEKVAEHIFQLEPDNTEYYVLLANSYAEAEQWEEVKKLRQKIGLHGPK 18
           L GCRI+HD+KLAEKVAEH+F+LEP+NT YYVLLAN YAEAE+WEEVKKLR++IG  G +
Sbjct: 628 LCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLR 687

Query: 17  KERDC 3
           K   C
Sbjct: 688 KNPGC 692


>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  191 bits (484), Expect = 7e-47
 Identities = 89/125 (71%), Positives = 103/125 (82%)
 Frame = -2

Query: 377 LLDEGWCLFNIMRNDCKIEPTLEHYTCMVDLLSRAGKLSKAYSFIKNMPIKADCFIWGVL 198
           LLDEGW  FN+MRN+C IEP  EHY C+VDLL+RAG LSKAY FIK MPI+ D  IWG L
Sbjct: 441 LLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGAL 500

Query: 197 LRGCRIHHDLKLAEKVAEHIFQLEPDNTEYYVLLANSYAEAEQWEEVKKLRQKIGLHGPK 18
           L GCRI+HD+KLAEKVAEH+F+LEP+NT YYVLLAN YAEAE+WEEVKKLR++IG  G +
Sbjct: 501 LCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLR 560

Query: 17  KERDC 3
           K   C
Sbjct: 561 KNPGC 565


>ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523812|gb|AET04266.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  190 bits (482), Expect = 1e-46
 Identities = 88/125 (70%), Positives = 103/125 (82%)
 Frame = -2

Query: 377 LLDEGWCLFNIMRNDCKIEPTLEHYTCMVDLLSRAGKLSKAYSFIKNMPIKADCFIWGVL 198
           LL+EGW  FN MRN+C +EP LEHY C+VDLL+R G LSKAY FI++MPIK D  IWGVL
Sbjct: 613 LLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVL 672

Query: 197 LRGCRIHHDLKLAEKVAEHIFQLEPDNTEYYVLLANSYAEAEQWEEVKKLRQKIGLHGPK 18
           L GCRIHHD+KLAEKVAEHIF+LEPDNT YYV+LAN YAEAE+WEEVKKLR+++   G K
Sbjct: 673 LSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFK 732

Query: 17  KERDC 3
           +   C
Sbjct: 733 QNPGC 737


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