BLASTX nr result

ID: Angelica23_contig00025604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025604
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulg...   104   7e-21

>ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435151|ref|YP_004222369.1| hypothetical
           protein BevumaM_p136 [Beta vulgaris subsp. maritima]
           gi|346683242|ref|YP_004842174.1| hypothetical protein
           BemaM_p130 [Beta macrocarpa] gi|9049306|dbj|BAA99316.1|
           orf107b [Beta vulgaris subsp. vulgaris]
           gi|317905601|emb|CBJ14008.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439884|emb|CBJ17584.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148038|emb|CBJ20702.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500160|emb|CBX24979.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977914|emb|CBL54138.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 107

 Score =  104 bits (260), Expect = 7e-21
 Identities = 62/82 (75%), Positives = 66/82 (80%)
 Frame = -1

Query: 372 PRYRTCDSHRIRLAQRLLNPSRAFFFYSTSPLQSSIKLAFPRR*LNGGLSFSPIVCIGLA 193
           PRYRTCDSHRIRLAQRLLNPSRA  F ST PLQSSIKLAF RR    G+  SPIVCIGLA
Sbjct: 30  PRYRTCDSHRIRLAQRLLNPSRA--FSSTFPLQSSIKLAFSRR-SEMGVFPSPIVCIGLA 86

Query: 192 SSRTREAFLRARACRKAGGSIS 127
           SSR++  +LRARACRKA   IS
Sbjct: 87  SSRSK-LYLRARACRKADHYIS 107


Top