BLASTX nr result

ID: Angelica23_contig00025437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025437
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...   146   4e-33
emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]   144   2e-32
ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containi...   128   9e-28
ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi...   128   9e-28

>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  146 bits (368), Expect = 4e-33
 Identities = 78/136 (57%), Positives = 97/136 (71%), Gaps = 2/136 (1%)
 Frame = -3

Query: 421 NTIHLKQFSSLNHGFAL--KFQDYKMTHKPLDEMPDSKHTFAWNTLIQTHLRNGNFDRAV 248
           N  H K  S+L     +  K  D+ +TH+  DE+P S +TFAWN LIQTHL NG+ DR V
Sbjct: 20  NATHCKNPSNLRSHVRMSQKSIDFGLTHQLFDEIPVS-NTFAWNNLIQTHLTNGDSDRVV 78

Query: 247 TTYQQMLLKGVRPDKHTLPRILSVSKLLGSLRLGKQLHGQAIKYDLSSCHYVHSALIELY 68
           +TY+QMLL+GVRPDKHT+PRIL+ ++   S   GKQ+HG A+K  LSS  YV SAL+E+Y
Sbjct: 79  STYRQMLLRGVRPDKHTIPRILTAARHTSSFSFGKQVHGHALKLGLSSESYVISALLEMY 138

Query: 67  GRLDGAEAAKWVFDKS 20
           GRLDGA AAK VF KS
Sbjct: 139 GRLDGANAAKLVFCKS 154


>emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]
          Length = 734

 Score =  144 bits (363), Expect = 2e-32
 Identities = 77/136 (56%), Positives = 97/136 (71%), Gaps = 2/136 (1%)
 Frame = -3

Query: 421 NTIHLKQFSSLNHGFAL--KFQDYKMTHKPLDEMPDSKHTFAWNTLIQTHLRNGNFDRAV 248
           N  H K  S+L     +  K  D+ +TH+  DE+P S +TFAWN LIQTHL NG+  R V
Sbjct: 115 NATHCKNPSNLRSXVRMSQKSIDFGLTHQLFDEIPVS-NTFAWNNLIQTHLTNGDSGRVV 173

Query: 247 TTYQQMLLKGVRPDKHTLPRILSVSKLLGSLRLGKQLHGQAIKYDLSSCHYVHSALIELY 68
           +TY+QMLL+GVRPDKHT+PRIL+ ++   S   GKQ+HG A+K  LSS  YV SAL+E+Y
Sbjct: 174 STYRQMLLRGVRPDKHTIPRILTAARHTSSFSFGKQVHGHALKLGLSSESYVISALLEMY 233

Query: 67  GRLDGAEAAKWVFDKS 20
           GRLDGA+AAK VF KS
Sbjct: 234 GRLDGABAAKLVFCKS 249


>ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|222841170|gb|EEE78717.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score =  134 bits (338), Expect = 1e-29
 Identities = 71/143 (49%), Positives = 95/143 (66%)
 Frame = -3

Query: 445 SNPEKSVPNTIHLKQFSSLNHGFALKFQDYKMTHKPLDEMPDSKHTFAWNTLIQTHLRNG 266
           S  ++S+ ++ H++  +  +   AL       THK LDE+P S  TFAWN LI THL N 
Sbjct: 22  SQCKRSLGHSSHVRVSTRFHRQLAL-------THKVLDEIPLSD-TFAWNNLIHTHLSNR 73

Query: 265 NFDRAVTTYQQMLLKGVRPDKHTLPRILSVSKLLGSLRLGKQLHGQAIKYDLSSCHYVHS 86
           +   A++ Y  M+++G  PD+ TLPR+L+ S++ G L LGKQLHGQAIK      HYV +
Sbjct: 74  DPGGALSIYHHMMMRGACPDRRTLPRVLTASRICGDLFLGKQLHGQAIKLGFFDEHYVIT 133

Query: 85  ALIELYGRLDGAEAAKWVFDKSP 17
           ALIE+YGRLDG EA KW+FDKSP
Sbjct: 134 ALIEIYGRLDGIEAGKWLFDKSP 156


>ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 429

 Score =  128 bits (322), Expect = 9e-28
 Identities = 63/116 (54%), Positives = 81/116 (69%)
 Frame = -3

Query: 352 MTHKPLDEMPDSKHTFAWNTLIQTHLRNGNFDRAVTTYQQMLLKGVRPDKHTLPRILSVS 173
           + H+  D++P    TFAWN LIQTHL NG+    ++TY+QML +GVRPDKHTLPRI+  +
Sbjct: 11  VAHQVFDDIP-IWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICAT 69

Query: 172 KLLGSLRLGKQLHGQAIKYDLSSCHYVHSALIELYGRLDGAEAAKWVFDKSPVAKS 5
           +  G L++GKQLH QA K   SS  YV ++LIELYG LD A+ AKW+ DKS    S
Sbjct: 70  RQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNS 125


>ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 629

 Score =  128 bits (322), Expect = 9e-28
 Identities = 63/116 (54%), Positives = 81/116 (69%)
 Frame = -3

Query: 352 MTHKPLDEMPDSKHTFAWNTLIQTHLRNGNFDRAVTTYQQMLLKGVRPDKHTLPRILSVS 173
           + H+  D++P    TFAWN LIQTHL NG+    ++TY+QML +GVRPDKHTLPRI+  +
Sbjct: 11  VAHQVFDDIP-IWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICAT 69

Query: 172 KLLGSLRLGKQLHGQAIKYDLSSCHYVHSALIELYGRLDGAEAAKWVFDKSPVAKS 5
           +  G L++GKQLH QA K   SS  YV ++LIELYG LD A+ AKW+ DKS    S
Sbjct: 70  RQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNS 125


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