BLASTX nr result

ID: Angelica23_contig00025409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025409
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...    41   5e-07

>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score = 41.2 bits (95), Expect(2) = 5e-07
 Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = -1

Query: 240 DLASTVGQELLDIAD*SPVVAFK--PXXXXXXXXXXXXXXSVIVVDLETTELK*LKSW 73
           DLA+ VGQELLD+AD SPVVA K                 S+I V+ +T E K LKSW
Sbjct: 358 DLATDVGQELLDMADKSPVVAIKALKVGDFQGVSLSTLGRSIIQVNPDTPESKKLKSW 415



 Score = 37.4 bits (85), Expect(2) = 5e-07
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = -2

Query: 74  GKEISMASVGTGLSPTSRSGG*SM 3
           GKE S+ASVG GLSP+++SGG SM
Sbjct: 420 GKETSLASVGAGLSPSTKSGGGSM 443


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