BLASTX nr result

ID: Angelica23_contig00025295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025295
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549749.1| PREDICTED: ABC transporter F family member 4...    59   4e-07
ref|XP_003542630.1| PREDICTED: ABC transporter F family member 4...    57   2e-06
emb|CBI35508.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002876258.1| ATGCN4 [Arabidopsis lyrata subsp. lyrata] gi...    55   6e-06
gb|AAM61469.1| putative ABC transporter [Arabidopsis thaliana]         55   6e-06

>ref|XP_003549749.1| PREDICTED: ABC transporter F family member 4-like [Glycine max]
          Length = 721

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/43 (67%), Positives = 38/43 (88%)
 Frame = -1

Query: 211 MGKKKSDESGVNAKAKANSKDAPKEAKKISVSAMLASMDQKPD 83
           MG+KK++++G +AK KA SKD PK+ +KISVSAMLASMD+KPD
Sbjct: 1   MGRKKTEDAGPSAKVKAGSKDPPKK-EKISVSAMLASMDEKPD 42


>ref|XP_003542630.1| PREDICTED: ABC transporter F family member 4-like [Glycine max]
          Length = 720

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/43 (65%), Positives = 38/43 (88%)
 Frame = -1

Query: 211 MGKKKSDESGVNAKAKANSKDAPKEAKKISVSAMLASMDQKPD 83
           MG+KK++++G +AK KA+SKD P + +KISVSAMLASMD+KPD
Sbjct: 1   MGRKKTEDAGPSAKVKASSKD-PAKKEKISVSAMLASMDEKPD 42


>emb|CBI35508.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
 Frame = -2

Query: 210 WERKNQTKVG*MQRLKQTVKMPQKKQRRSLY--RQCLPAWTRNQIKPKKDHQPQ--LLAN 43
           WE + Q  V  +QRL    KMP +  R+  +  R CL AWTRN I P++D  PQ  LLA+
Sbjct: 83  WEGRKQRIVVQLQRLSLATKMPPRMGRKRSFQSRPCLLAWTRNLINPRRDLHPQAPLLAS 142

Query: 42  QSQKQLQ 22
             QKQLQ
Sbjct: 143 PKQKQLQ 149


>ref|XP_002876258.1| ATGCN4 [Arabidopsis lyrata subsp. lyrata]
           gi|297322096|gb|EFH52517.1| ATGCN4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 723

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = -1

Query: 211 MGKKKSDESGVNAKAKANSKDAPKEAK--KISVSAMLASMDQKPD 83
           MGKKKSDES    K K + KDA K++K  K+SVSAMLA MDQK D
Sbjct: 1   MGKKKSDESAATTKVKPSGKDASKDSKKEKLSVSAMLAGMDQKDD 45


>gb|AAM61469.1| putative ABC transporter [Arabidopsis thaliana]
          Length = 723

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = -1

Query: 211 MGKKKSDESGVNAKAKANSKDAPKEAK--KISVSAMLASMDQKPD 83
           MGKKKSDES    K K + KDA K++K  K+SVSAMLA MDQK D
Sbjct: 1   MGKKKSDESAATTKVKPSGKDASKDSKKEKLSVSAMLAGMDQKDD 45


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