BLASTX nr result

ID: Angelica23_contig00025178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025178
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...   120   1e-25
emb|CBI40396.3| unnamed protein product [Vitis vinifera]              120   1e-25
emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]   120   1e-25
ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com...   103   1e-20
ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [...   101   5e-20

>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score =  120 bits (300), Expect = 1e-25
 Identities = 74/134 (55%), Positives = 90/134 (67%), Gaps = 10/134 (7%)
 Frame = -2

Query: 384 SQGGKLPHLPQHS-GFTKQQLHVLKAQILVFRRLKKGDGTLPRELLQAIAPPPLEEQMLQ 208
           SQGG LP +PQ   GFTKQQLHVLKAQIL FRRLKKG+GTLP+ELL++IAPPPLE Q+ Q
Sbjct: 473 SQGGPLPQVPQQRFGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRSIAPPPLESQLQQ 532

Query: 207 ASQPGPT---DASAGKDVDTEDHIERMKCSEKD---LLTNAGLNNVKREAVAEDEKKNSS 46
           A  P      D SAGK+V  EDH  +++ +EKD   + +  G N  K EA A D+K   S
Sbjct: 533 AFLPSTAINQDKSAGKNV--EDHGRQLESNEKDSQAVPSTNGHNFSKEEAFAGDDKATPS 590

Query: 45  KQIV---PAVLKEP 13
              +   P V+KEP
Sbjct: 591 TVHMPGAPTVMKEP 604


>emb|CBI40396.3| unnamed protein product [Vitis vinifera]
          Length = 1981

 Score =  120 bits (300), Expect = 1e-25
 Identities = 74/134 (55%), Positives = 90/134 (67%), Gaps = 10/134 (7%)
 Frame = -2

Query: 384 SQGGKLPHLPQHS-GFTKQQLHVLKAQILVFRRLKKGDGTLPRELLQAIAPPPLEEQMLQ 208
           SQGG LP +PQ   GFTKQQLHVLKAQIL FRRLKKG+GTLP+ELL++IAPPPLE Q+ Q
Sbjct: 473 SQGGPLPQVPQQRFGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRSIAPPPLESQLQQ 532

Query: 207 ASQPGPT---DASAGKDVDTEDHIERMKCSEKD---LLTNAGLNNVKREAVAEDEKKNSS 46
           A  P      D SAGK+V  EDH  +++ +EKD   + +  G N  K EA A D+K   S
Sbjct: 533 AFLPSTAINQDKSAGKNV--EDHGRQLESNEKDSQAVPSTNGHNFSKEEAFAGDDKATPS 590

Query: 45  KQIV---PAVLKEP 13
              +   P V+KEP
Sbjct: 591 TVHMPGAPTVMKEP 604


>emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]
          Length = 2238

 Score =  120 bits (300), Expect = 1e-25
 Identities = 74/134 (55%), Positives = 90/134 (67%), Gaps = 10/134 (7%)
 Frame = -2

Query: 384 SQGGKLPHLPQHS-GFTKQQLHVLKAQILVFRRLKKGDGTLPRELLQAIAPPPLEEQMLQ 208
           SQGG LP +PQ   GFTKQQLHVLKAQIL FRRLKKG+GTLP+ELL++IAPPPLE Q+ Q
Sbjct: 473 SQGGPLPQVPQQRFGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRSIAPPPLESQLQQ 532

Query: 207 ASQPGPT---DASAGKDVDTEDHIERMKCSEKD---LLTNAGLNNVKREAVAEDEKKNSS 46
           A  P      D SAGK+V  EDH  +++ +EKD   + +  G N  K EA A D+K   S
Sbjct: 533 AFLPSTAINQDKSAGKNV--EDHGRQLESNEKDSQAVPSTNGHNFSKEEAFAGDDKATPS 590

Query: 45  KQIV---PAVLKEP 13
              +   P V+KEP
Sbjct: 591 TVHMPGAPTVMKEP 604


>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
           gi|223549062|gb|EEF50551.1| Chromo domain protein,
           putative [Ricinus communis]
          Length = 2248

 Score =  103 bits (257), Expect = 1e-20
 Identities = 67/137 (48%), Positives = 85/137 (62%), Gaps = 7/137 (5%)
 Frame = -2

Query: 390 SSSQGGKLPHLPQHS-GFTKQQLHVLKAQILVFRRLKKGDGTLPRELLQAIAPPPLEEQM 214
           +SSQG     + Q+  GFTKQQLHVLKAQIL FRRLKKG+GTLP+ELL+AIAPPPLE Q+
Sbjct: 466 NSSQGTPSVQMAQNRVGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLELQL 525

Query: 213 LQASQP---GPTDASAGKDV-DTEDHIERMKCSEKDLLTNAGLNNVKREAVAEDEKKNSS 46
            Q   P      D S GK + D   H+E  + + + + +  G N  K EAVA  EK   S
Sbjct: 526 QQQFLPAGGSNQDRSGGKILEDQAKHLESNEKNSQAMPSMNGQNAAKEEAVAGVEKPTVS 585

Query: 45  KQIV--PAVLKEPSSSV 1
              +  P   K+P++SV
Sbjct: 586 ASNIEGPTAAKDPTTSV 602


>ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [Cucumis sativus]
          Length = 2247

 Score =  101 bits (252), Expect = 5e-20
 Identities = 69/144 (47%), Positives = 87/144 (60%), Gaps = 18/144 (12%)
 Frame = -2

Query: 393 PSSSQGGKLPHLPQ--HS--------GFTKQQLHVLKAQILVFRRLKKGDGTLPRELLQA 244
           P+S  G     LPQ  HS        GFTK QLHVLKAQIL FRRLKKG+GTLP+ELL+A
Sbjct: 458 PTSDGGSSNSTLPQGGHSNQTAQQRFGFTKHQLHVLKAQILAFRRLKKGEGTLPQELLRA 517

Query: 243 IAPPPLEEQMLQASQPGPT--DASAGKDVDTEDHIERMKCSEKDLLTNAGLNNVK--REA 76
           IAPPPL+ Q  Q   PG T  D S+GK V+   ++E    +EKD L+ A  N  +  RE 
Sbjct: 518 IAPPPLDVQQQQFLPPGSTSQDKSSGKTVEDTGNVE---ATEKDSLSLASSNGHRFPREE 574

Query: 75  VAEDEKKN----SSKQIVPAVLKE 16
           V+  ++K+    S  Q +P  +KE
Sbjct: 575 VSTGDEKSKTSTSDVQPMPPAMKE 598


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