BLASTX nr result

ID: Angelica23_contig00025073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025073
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]         156   2e-36
ref|XP_002305094.1| glutamate-gated kainate-type ion channel rec...   152   2e-35
ref|XP_002305093.1| glutamate-gated kainate-type ion channel rec...   148   4e-34
ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Viti...   148   5e-34
emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera]   148   5e-34

>dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]
          Length = 925

 Score =  156 bits (394), Expect = 2e-36
 Identities = 70/106 (66%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
 Frame = +3

Query: 9   NKNFDAVVGDITILANRAKYVEFTQPFAESGLSMMVQYKHEPSK-AWLFLKPFSPNMWLA 185
           N  +DA+VGDITILA R KY+EFTQPFAESGL+M+V  K + SK AW+FLKPF+ NMW+A
Sbjct: 514 NGRYDAIVGDITILAERTKYIEFTQPFAESGLTMVVPVKFDKSKKAWMFLKPFTGNMWVA 573

Query: 186 TFGILFYTMFIVWFFERKSNPEFKGAFRDQLGMALWFTFSNMFFAH 323
           T  +L YTM +VWF E +SNPEF+G ++DQLG A+WFTFS++FFAH
Sbjct: 574 TGSVLVYTMLVVWFMEHQSNPEFRGRWKDQLGTAMWFTFSSLFFAH 619


>ref|XP_002305094.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848058|gb|EEE85605.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 784

 Score =  152 bits (385), Expect = 2e-35
 Identities = 70/105 (66%), Positives = 86/105 (81%)
 Frame = +3

Query: 9   NKNFDAVVGDITILANRAKYVEFTQPFAESGLSMMVQYKHEPSKAWLFLKPFSPNMWLAT 188
           NK FDA+VGD+TILANR+  VEFTQP+AESGLSM+V  K E S AW+F+KPF+  MWL T
Sbjct: 373 NKTFDAIVGDVTILANRSDKVEFTQPYAESGLSMIVSAKSEES-AWMFMKPFTKEMWLVT 431

Query: 189 FGILFYTMFIVWFFERKSNPEFKGAFRDQLGMALWFTFSNMFFAH 323
             IL YTMFIVWF E  +NPEFKG +++Q+G ALWFTFS+++FAH
Sbjct: 432 GAILIYTMFIVWFLEHHTNPEFKGPWKNQMGTALWFTFSSLYFAH 476


>ref|XP_002305093.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848057|gb|EEE85604.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 931

 Score =  148 bits (374), Expect = 4e-34
 Identities = 66/105 (62%), Positives = 87/105 (82%)
 Frame = +3

Query: 9   NKNFDAVVGDITILANRAKYVEFTQPFAESGLSMMVQYKHEPSKAWLFLKPFSPNMWLAT 188
           NK +DA+VGD+TILA+RA+ VEFTQP+AESGLSM+V  K++ S AW+F+KPF+  MWL T
Sbjct: 518 NKTYDAIVGDVTILASRAEKVEFTQPYAESGLSMIVPAKYKES-AWMFMKPFTKEMWLVT 576

Query: 189 FGILFYTMFIVWFFERKSNPEFKGAFRDQLGMALWFTFSNMFFAH 323
             +L YTMFIVWF E  +NPEF G +++Q+G ALWFTFS+++FAH
Sbjct: 577 GAVLIYTMFIVWFLEHHTNPEFNGPWKNQIGTALWFTFSSLYFAH 621


>ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 916

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/105 (65%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
 Frame = +3

Query: 12  KNFDAVVGDITILANRAKYVEFTQPFAESGLSMMVQYK-HEPSKAWLFLKPFSPNMWLAT 188
           K +DAVVGD+TILANR++ VEFTQPFAESGLSM+   K  E  KAWLF+KPF+  MW+ T
Sbjct: 528 KTYDAVVGDMTILANRSRIVEFTQPFAESGLSMITPVKSREAYKAWLFMKPFTMEMWVVT 587

Query: 189 FGILFYTMFIVWFFERKSNPEFKGAFRDQLGMALWFTFSNMFFAH 323
             IL YTMFIVW  E ++NPEF+G+++DQLG  LWFTFS++FFAH
Sbjct: 588 GVILIYTMFIVWILEHQNNPEFQGSWKDQLGTTLWFTFSSLFFAH 632


>emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera]
          Length = 916

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/105 (65%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
 Frame = +3

Query: 12  KNFDAVVGDITILANRAKYVEFTQPFAESGLSMMVQYK-HEPSKAWLFLKPFSPNMWLAT 188
           K +DAVVGD+TILANR++ VEFTQPFAESGLSM+   K  E  KAWLF+KPF+  MW+ T
Sbjct: 528 KTYDAVVGDMTILANRSRIVEFTQPFAESGLSMITPVKSREAYKAWLFMKPFTMEMWVVT 587

Query: 189 FGILFYTMFIVWFFERKSNPEFKGAFRDQLGMALWFTFSNMFFAH 323
             IL YTMFIVW  E ++NPEF+G+++DQLG  LWFTFS++FFAH
Sbjct: 588 GVILIYTMFIVWILEHQNNPEFQGSWKDQLGTTLWFTFSSLFFAH 632


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