BLASTX nr result

ID: Angelica23_contig00025066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025066
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   129   2e-28
ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28
ref|XP_002520617.1| pentatricopeptide repeat-containing protein,...   125   4e-27
ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26

>ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/92 (65%), Positives = 73/92 (79%)
 Frame = +1

Query: 1   DEMPRRDQVCWASILTAHTHANLPKRTLSMFRFMVSVDGLQPDHFVFTSLVKACTSLGSL 180
           DEMP RD V WASILTAH  A +P+RTLSM   M + DGLQPDHFVF  +V+AC+SLG L
Sbjct: 62  DEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYL 121

Query: 181 RMGLQVHARFLSSCYSNDDVVKSALVDMYAKC 276
           R+G QVHARF+ S + +D+VVKS+L+DMY KC
Sbjct: 122 RLGKQVHARFMLSXFCDDEVVKSSLIDMYTKC 153


>ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|222845929|gb|EEE83476.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/92 (66%), Positives = 75/92 (81%)
 Frame = +1

Query: 1   DEMPRRDQVCWASILTAHTHANLPKRTLSMFRFMVSVDGLQPDHFVFTSLVKACTSLGSL 180
           DEMP+RD V WASILTA+  A LP +TLS+F +M + D LQPDHFV+ +L+KAC SL SL
Sbjct: 61  DEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSL 120

Query: 181 RMGLQVHARFLSSCYSNDDVVKSALVDMYAKC 276
           R+G QVHARF+ S + +DDVVKS+LVDMYAKC
Sbjct: 121 RLGKQVHARFVLSPFVDDDVVKSSLVDMYAKC 152


>ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/92 (65%), Positives = 73/92 (79%)
 Frame = +1

Query: 1   DEMPRRDQVCWASILTAHTHANLPKRTLSMFRFMVSVDGLQPDHFVFTSLVKACTSLGSL 180
           DEMP RD V WASILTAH  A +P+RTLSM   M + DGLQPDHFVF  +V+AC+SLG L
Sbjct: 62  DEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYL 121

Query: 181 RMGLQVHARFLSSCYSNDDVVKSALVDMYAKC 276
           R+G QVHARF+ S + +D+VVKS+L+DMY KC
Sbjct: 122 RLGKQVHARFMLSFFCDDEVVKSSLIDMYTKC 153


>ref|XP_002520617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540178|gb|EEF41753.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 344

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/92 (65%), Positives = 75/92 (81%)
 Frame = +1

Query: 1   DEMPRRDQVCWASILTAHTHANLPKRTLSMFRFMVSVDGLQPDHFVFTSLVKACTSLGSL 180
           +EMP+RD V WASILTA+  ANLP +TLS+F  M  VD L+PDHFV+ +LVKAC SL ++
Sbjct: 62  EEMPQRDHVSWASILTAYNLANLPNKTLSIFPTMFIVDKLEPDHFVYATLVKACASLCAV 121

Query: 181 RMGLQVHARFLSSCYSNDDVVKSALVDMYAKC 276
           R G QVHARF+ S +S+DDVVKS+L+DMYAKC
Sbjct: 122 RQGKQVHARFVLSPFSDDDVVKSSLIDMYAKC 153


>ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/92 (63%), Positives = 70/92 (76%)
 Frame = +1

Query: 1   DEMPRRDQVCWASILTAHTHANLPKRTLSMFRFMVSVDGLQPDHFVFTSLVKACTSLGSL 180
           +++P RD + WASILTA+  ANLP  TLSMF  M   DGLQPDH+VF  LVKAC  LG++
Sbjct: 62  NQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAM 121

Query: 181 RMGLQVHARFLSSCYSNDDVVKSALVDMYAKC 276
           + G QVHA F+ S  S+DDVVKS+LVDMYAKC
Sbjct: 122 KQGKQVHATFIVSPVSDDDVVKSSLVDMYAKC 153


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