BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025049
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...    77   4e-28
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    75   3e-27
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    75   3e-27
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                  77   4e-27
emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]    77   2e-26

>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score = 77.0 bits (188), Expect(2) = 4e-28
 Identities = 31/62 (50%), Positives = 46/62 (74%)
 Frame = +1

Query: 64  VEEKEQRENLFHTRAAVGDRTCNVIVDTGSCVNVTSSKMVNALKLPTKDRPKPYKLNWLN 243
           ++++EQREN+F+ +  +   TC+ I+D GSC NV S  +VNA+K+PT   P+PYKL WLN
Sbjct: 395 LDQEEQRENIFYGKCKIPGATCSFIIDGGSCTNVISEDVVNAMKIPTIQHPQPYKLQWLN 454

Query: 244 DN 249
           D+
Sbjct: 455 DD 456



 Score = 72.8 bits (177), Expect(2) = 4e-28
 Identities = 28/53 (52%), Positives = 42/53 (79%)
 Frame = +3

Query: 258 VKKQALVTFSIGNYRDELWCDVVPVTACSLLLGRPWQFDGEVMFHDKKNEYSV 416
           V KQAL++ SIG Y+D++ CDV+P+ AC +LLGRPWQ+D + + H K N+Y++
Sbjct: 461 VHKQALISISIGKYQDDVLCDVIPMHACHILLGRPWQYDRDTLHHGKTNKYTI 513


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 74.7 bits (182), Expect(2) = 3e-27
 Identities = 29/54 (53%), Positives = 41/54 (75%)
 Frame = +3

Query: 258 VKKQALVTFSIGNYRDELWCDVVPVTACSLLLGRPWQFDGEVMFHDKKNEYSVL 419
           V KQ +++F++G Y DE+ CDVVP+ AC +LLGRPWQ+D +   H +KN YS+L
Sbjct: 479 VNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTTHHGRKNRYSLL 532



 Score = 72.0 bits (175), Expect(2) = 3e-27
 Identities = 35/75 (46%), Positives = 50/75 (66%)
 Frame = +1

Query: 22  IGLLRRLLRTDSTPVEEKEQRENLFHTRAAVGDRTCNVIVDTGSCVNVTSSKMVNALKLP 201
           IG++RR++  +   V+E  QRENLFHTR  +  +T ++I+D GSC NV SS +V+ L + 
Sbjct: 400 IGVVRRIMTINLGSVDEG-QRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIA 458

Query: 202 TKDRPKPYKLNWLND 246
              R  PY+L WLND
Sbjct: 459 CMKRSTPYRLQWLND 473


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 74.7 bits (182), Expect(2) = 3e-27
 Identities = 29/54 (53%), Positives = 41/54 (75%)
 Frame = +3

Query: 258 VKKQALVTFSIGNYRDELWCDVVPVTACSLLLGRPWQFDGEVMFHDKKNEYSVL 419
           V KQ +++F++G Y DE+ CDVVP+ AC +LLGRPWQ+D +   H +KN YS+L
Sbjct: 479 VNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTTHHGRKNRYSLL 532



 Score = 72.0 bits (175), Expect(2) = 3e-27
 Identities = 35/75 (46%), Positives = 50/75 (66%)
 Frame = +1

Query: 22  IGLLRRLLRTDSTPVEEKEQRENLFHTRAAVGDRTCNVIVDTGSCVNVTSSKMVNALKLP 201
           IG++RR++  +   V+E  QRENLFHTR  +  +T ++I+D GSC NV SS +V+ L + 
Sbjct: 400 IGVVRRIMTINLGSVDEG-QRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIA 458

Query: 202 TKDRPKPYKLNWLND 246
              R  PY+L WLND
Sbjct: 459 CMKRSTPYRLQWLND 473


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score = 77.4 bits (189), Expect(2) = 4e-27
 Identities = 33/69 (47%), Positives = 46/69 (66%)
 Frame = +1

Query: 37  RLLRTDSTPVEEKEQRENLFHTRAAVGDRTCNVIVDTGSCVNVTSSKMVNALKLPTKDRP 216
           R++ T   P+E  +QR+ +F +R  +  R CN+I+D GSC NV SS ++  L LPT+D P
Sbjct: 371 RVMHTQPQPLE-MDQRQQIFRSRCTIKGRVCNLIIDGGSCTNVASSTLIEKLSLPTQDHP 429

Query: 217 KPYKLNWLN 243
            PYKL WLN
Sbjct: 430 SPYKLRWLN 438



 Score = 68.9 bits (167), Expect(2) = 4e-27
 Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
 Frame = +3

Query: 258 VKKQALVTFSIG-NYRDELWCDVVPVTACSLLLGRPWQFDGEVMFHDKKNEYS 413
           V KQ LVTFSIG NY DE  CDV+P+ AC LLLGRPW+FD + + H + N Y+
Sbjct: 445 VDKQCLVTFSIGKNYSDEALCDVLPMDACHLLLGRPWEFDRDSVHHGRDNTYT 497


>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
          Length = 818

 Score = 77.4 bits (189), Expect(2) = 2e-26
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +1

Query: 73  KEQRENLFHTRAAVGDRTCNVIVDTGSCVNVTSSKMVNALKLPTKDRPKPYKLNWLND 246
           ++QREN+FHTR  + ++ C++I+D GSC NV S+ +V  L LPT   P+PYKL WLND
Sbjct: 409 EQQRENIFHTRCHINNKVCSMIIDGGSCTNVASTTLVENLNLPTLKHPRPYKLQWLND 466



 Score = 66.6 bits (161), Expect(2) = 2e-26
 Identities = 30/54 (55%), Positives = 39/54 (72%)
 Frame = +3

Query: 258 VKKQALVTFSIGNYRDELWCDVVPVTACSLLLGRPWQFDGEVMFHDKKNEYSVL 419
           V K+ LV+FSIG Y+DE+ CD+VP+ A  +LLGRPWQFD +V     KN YS +
Sbjct: 472 VNKEVLVSFSIGRYKDEVLCDIVPMHAGHILLGRPWQFDRKVNHDGFKNRYSFI 525